Query= MSMg01no108_h24.b1 MSMg01no108_h24.b1 CHROMAT_FILE:
MSMg01no108_h24.b1 PHD_FILE: MSMg01no108_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:23 2005
(498 letters)
>mm_chr2_9749884_9750781
Length = 898
Score = 878 bits (454), Expect = 0.0
Identities = 487/498 (97%)
Strand = Plus / Plus
Query: 1 gtactagggtggcaagcagatttcttctcaatgaaatgagaacttcagcagctgtccacg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gtactaaggtggcaagcagatttcttctcaatgaaatgagaacttcagcagttgtccacg 260
Query: 61 gtggctcttaatgctaccactcataaggcagagacaggaagacggccatgaattcaaggc 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 261 gtggctcttaatgctaccactcagaaggcagagacaggaagacggccatgaattcaagtc 320
Query: 121 caccatgtactgtactgtgaaactttctctcaagaataaataaatgtggaccagcaagat 180
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 321 caccatgcactgtactgtgaaactttctctcaagaataaataaatatggaccagcaagtt 380
Query: 181 gtctcagcaggtaaaggtgcctgtcaccagctctgatgagctgagttcagtctctaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctcagcaggtaaaggtgcctgtcaccagctctgatgagctgagttcagtctctaggac 440
Query: 241 acactctcaagttttcctctgccttccacacatgcatcatagcacaagtgtgcgcatgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acactctcaagttttcctctgccttccacacatgcatcatagcacaagtgtgcgcatgca 500
Query: 301 catacacacacaaaataaagatcatttgtaagcaaatacataagtaaatacaagaacttt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 catacacacacaaaataaagatcatttgtaagcaaatacataagtaaatagaagaacttt 560
Query: 361 ctagctagaaacttccatgggtggcagcagaggaatgagctagcaaaagcaaacaacaag 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctagctagaaccttccatgggtggcagcagaggaatgagctagcaaaagcaaacaacaag 620
Query: 421 caacaaaagggaaggcccttccatgaaattgcttctgtaagtgtacacagacccttgtct 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 caacaaaagggaaggcccttccatgaaattgcttctgtaaatgtacacagacccttgtct 680
Query: 481 aactttttgtttatttaa 498
|| |||||||||||||||
Sbjct: 681 aattttttgtttatttaa 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_h24.g1 MSMg01no108_h24.g1 CHROMAT_FILE:
MSMg01no108_h24.g1 PHD_FILE: MSMg01no108_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:23 2005
(157 letters)
>mm_chr2_9857378_9857936
Length = 559
Score = 281 bits (145), Expect = 2e-80
Identities = 155/159 (97%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 1 agggacctccctgctcagctcctccctccctccaaggcctgtcaggcagctatgtctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agggacctccctgctcagctcctccctccctccaaggcctgtcaggcagctatgtctgct 300
Query: 61 cagaagtgagagctctgagagtttgcctgggttgcaaggggaattgtgtttcacggcttc 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 299 cagaagtgagagctctgagagtttgcctggtttgcaaggggaattgtgtttctcggcttc 240
Query: 121 ccccagttttctggttgggtttgagat--gggggggggg 157
||||||||||||||||||||||||||| ||||||||||
Sbjct: 239 ccccagttttctggttgggtttgagatacgggggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 559
Length adjustment: 8
Effective length of query: 149
Effective length of database: 551
Effective search space: 82099
Effective search space used: 82099
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
