Query= MSMg01no108_k24.b1 MSMg01no108_k24.b1 CHROMAT_FILE:
MSMg01no108_k24.b1 PHD_FILE: MSMg01no108_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:37 2005
(667 letters)
>mm_chr2_64371706_64372772
Length = 1067
Score = 1067 bits (552), Expect = 0.0
Identities = 564/568 (99%)
Strand = Plus / Minus
Query: 6 gaattcactttttcttgctccattattttaggaattacatagggaggtgaataaattcat 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaattcactttttcttgatccattattttaggaattacatagggaggtgaataaattcat 509
Query: 66 agttaggcatgagtaccaggatacacatttttcatgctctaatatatctgaggccatgtc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agttaggcatgagtaccaggatacacatttttcatgctctaatatatctgaggccatgtc 449
Query: 126 ctgtggagcagaaaactaggctccaactatacctgcctgccaaaagtattcaaacaagaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgtggagcagaaaactaggctccaactatacctgcctgccaaaagtattcaaacaagaa 389
Query: 186 gctgccatatctagaactaaaacgatccaattgatcatgcctgttgtgtctctactacct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gctgccatatctagaactaaaacgatccaattgatcatgcctgttgtgtctctactacct 329
Query: 246 tctttcacaccattcacatgttgatgcttctgttgctgctatctacaactccccaaacca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctttcacaccattcacatgttgatgcttctgttgctgctatctacaactccccaaacca 269
Query: 306 gtaaagcaggctaatccacattggctgtttggcttactaaaactactgcatttatggatg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtaaagcaggctaatccacattggctgtttggcttactaaaactactgcatttatggatg 209
Query: 366 taataatctcaatcagtggtttccaccccacctctgatcattcagttcccagataaaaaa 425
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 208 taataatctcaatcagtggtttccaccccacctttgatcattcagttcccagataaaaaa 149
Query: 426 cacagaaacaaaaaccacaaaacttataaaaatataataattattgtatttataataagc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cacagaaacaaaaaccacaaaacttataaaaatataataattattgtatttataataagc 89
Query: 486 cttactcagcactagagatggactatttaccctctatgctattaatgtctacttcttgac 545
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 88 cttactcagcactagagatagactatttaccctctatgctattagtgtctacttcttgac 29
Query: 546 tattggccccaaggtataacttgccatg 573
||||||||||||||||||||||||||||
Sbjct: 28 tattggccccaaggtataacttgccatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_k24.g1 MSMg01no108_k24.g1 CHROMAT_FILE:
MSMg01no108_k24.g1 PHD_FILE: MSMg01no108_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:37 2005
(582 letters)
>mm_chr2_64206381_64207363
Length = 983
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 1 gcactctaacgaaatgaagagctctctatctctttggccagttttgacatggctttggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcactctaacgaaatgaagagctctctatctctttggccagttttgacatggctttggtt 260
Query: 61 ggcatgctaattctttgagtagcacccttgaaaatcatgctaatgagctcttcagttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcatgctaattctttgagtagcacccttgaaaatcatgctaatgagctcttcagttcat 320
Query: 121 caagtaggattgtggacctttttgtctgcatcattaaggccccaaattgccccattagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagtaggattgtggacctttttgtctgcatcattaaggccccaaattgccccattagca 380
Query: 181 aggcctgaagttgcccctcagggtcaatatttaatgcaggtgagcttgggttaactacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcctgaagttgcccctcagggtcaatatttaatgcaggtgagcttgggttaactacca 440
Query: 241 tcaggagcctctggacaacaaacagtgtagagtgctagctacaggcaaatttattttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggagcctctggacaacaaacagtgtagagtgctagctacaggcaaatttattttctc 500
Query: 301 cctaaatttgccctataacataccagtttcgatattggatttatgttttaaactcatttg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctaaatttgccctataacataccagtttcgatattggatttatgttttaaactcatttt 560
Query: 361 ggggacaataaacacttgggg-ttattttgtgttgttgatttcaaaagggtgaattttaa 419
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggacaataaacacttggggattattttgtgttgttgatttcaaaagggtgaattttaa 620
Query: 420 aataaaagcttttctttctttttttttttccatgaagctcttttacctatctatggctca 479
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aataaaagtttttctttctttttttttttccatgaagctcttttacctatctatggctca 680
Query: 480 tagctttcacttccccatctgtaaaatgggaataattctattgctttttgggaaacttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagctttcacttccccatctgtaaaatgggaataattctattgctttttgggaaacttga 740
Query: 540 gtggatggtgtttcccttcttaacaaactggagatctgatata 582
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 gtggatggtgtttcccttcttagcaaactggagatctgatata 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 983
Length adjustment: 10
Effective length of query: 572
Effective length of database: 973
Effective search space: 556556
Effective search space used: 556556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
