Query= MSMg01no108_m08.b1 MSMg01no108_m08.b1 CHROMAT_FILE:
MSMg01no108_m08.b1 PHD_FILE: MSMg01no108_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:44 2005
(659 letters)
>mm_chr2_180694328_180695386
Length = 1059
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcatgctgacctggacttttcagtgatgtagctgcatttgaattaccctcagc 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcatgctgacgtggacttttcagtgatgtagctgcatttgaattaccctcagc 263
Query: 64 ctgtaagcaatcccttatttatgtttctgtaagcaatcctgataaacacacttatttatt 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgtaagcaatcctttatttatgtttctgtaagcaatcctgataaacacacttatttatt 323
Query: 124 aagctatacttggatggagaagtttctttggcctatagtcaatgttttatcgggggttaa 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 aagctatacttggatggagaagtttctttggcctatagtcgatgttttatcgggggttaa 383
Query: 184 tagatgcttgcccatgtacccttaggaaaattcaatctccggtctctaggagagcagaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagatgcttgcccatgtacccttaggaaaattcaatctccggtctctaggagagcagaac 443
Query: 244 tccctgtagcagaaggacccatgcctggagtctaacagtatgagggcggagactcttccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tccctgtagcagaaggacccatgcctggagtctaacagtatgagggcggagactcttccc 503
Query: 304 ttggctacatacctgggtttctgagaacctctccataagagcccaaggccatgggtcaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttggctacatacctgggtttctgagaacctctccataagagcccaaggccatgggtcaga 563
Query: 364 ccaggatatcttggaacctcatctttagcatcagaaactcatggatcaaagagtcaagta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaggatatcttggaacctcatctttagcatcagaaactcatggatcaaagagtcaagta 623
Query: 424 aagcagaggcaggcggggctgatgtttttctcacaagctttcaagcattagtttcattaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagcagaggcaggcggggctgatgtttttctcacaagctttcaagcattagtttcattaa 683
Query: 484 acaaactggaaaaactcaaagagatcaaaagccagctgcaagccccattggctccctctg 543
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acaaactggaagaactcaaagagatcaaaagccagctgcaagccccattggctccctctg 743
Query: 544 ccctctcctgaggttagcagctgctctctttcagtgtatcctatgtatattccctgggcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccctctcctgaggttagcagctgctctctttcagtgtatcctatgtatattccctgggcc 803
Query: 604 tctcccccgacttttcttctctgttactctgtctttcatgacagagtccatacca 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tctcccccgacttttcttctctgttactctgtctttcatgacagagtccatacca 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_m08.g1 MSMg01no108_m08.g1 CHROMAT_FILE:
MSMg01no108_m08.g1 PHD_FILE: MSMg01no108_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:44 2005
(524 letters)
>mm_chr2_180795874_180796798
Length = 925
Score = 984 bits (509), Expect = 0.0
Identities = 521/525 (99%), Gaps = 1/525 (0%)
Strand = Plus / Minus
Query: 1 cttctgtcatgatatgctgcacatttctctacactttctcac-caggtttagctctctgg 59
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 725 cttctgtcatgatgtgctgcacatttctctacactttctcacacaggtttagctctctgg 666
Query: 60 ggagctgggggttggtgtgacagatgccaggctcttcagtgttcttatctttgccaatag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggagctgggggttggtgtgacagatgccaggctcttcagtgttcttatctttgccaatag 606
Query: 120 ttaatcctgtatggtattggtgaaaaacacctgggtttctctacccttcctgagggcaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttaatcctgtatggtattggtgaaaaacacctgggtttctctacccttcctgagggcaag 546
Query: 180 tccctcaggtagaagttgacccgtttctccagagtcaggtatctacctttctatacttgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tccctcaggtagaagttgacccgtttctccagagtcaggtatctacctttctatacttgc 486
Query: 240 cagagtctcttagagctttggaagctcgtataccctgaggcccaggcaaccctggctgcc 299
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cagagtctcttagagctttgaaagctcgtataccctgaggcccaggcaaccctggctgcc 426
Query: 300 ctagggagctggctttcacagctgtgcactgcagggatggtgggccctgaccagtccact 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctagggagctggctttcacagctgtgcactgcagggatggtgggccctgaccagtccact 366
Query: 360 aagagataatggaatcttatgtggggcagcacagaatgtgctctcaccctcagtctctga 419
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 365 aagagataatggaatcttatgtggggcagcacagaaggtgctctcaccctcagtctctga 306
Query: 420 gaatcccaaacacccagttctatgatcccagcagtagaaggtaaaggttgatgtatgcgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gaatcccaaacacccagttctatgatcccagcagtagaaggtaaaggttgatgtatgcgg 246
Query: 480 ccacaggaaactttagtaatgctactgtcttgatagtcggtggag 524
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccacaggaaactttagtaatgctactgtcttgatagtcggtggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
