Query= MSMg01no109_c04.b1 MSMg01no109_c04.b1 CHROMAT_FILE:
MSMg01no109_c04.b1 PHD_FILE: MSMg01no109_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:14 2005
(491 letters)
>mm_chr2_111502171_111503061
Length = 891
Score = 915 bits (473), Expect = 0.0
Identities = 484/491 (98%), Gaps = 7/491 (1%)
Strand = Plus / Plus
Query: 5 gaattcagctga----tcctaaaatcattacccataattttgaacacaatattgtttaaa 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagctgaagggt---aaaatcattacccataattttgaacacaatattgtttaaa 260
Query: 61 gatacactaagaatgaagaaagaaaacaatacaaactttaacatactctgattgtgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatacactaagaatgaagaaagaaaacaatacaaactttaacatactctgattgtgataa 320
Query: 121 aatgcatgtgttttctttataaaattttattttacatattcataatacactattgaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgcatgtgttttctttataaaattttattttacatattcataatacactattgaaaca 380
Query: 181 aagaaatgtttgtgtcatggttataatgtcaatagatcatagtgatttggccaagtatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaaatgtttgtgtcatggttataatgtcaatagatcatagtgatttggccaagtatca 440
Query: 241 ctattttttaaatgaatatcaagtctattaaatatattatatgtacatagctgttaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctattttttaaatgaatatcaagtctattaaatatattatatgtacatagctgttaatag 500
Query: 301 agtgattacccattccacagtagtttaataaactccaatttttaaatgttatgttttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgattacccattccacagtagtttaataaactccaatttttaaatgttatgttttttc 560
Query: 361 ttgctccaatgtttcatgagaagccacataattacattttaataaattcctttctcaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgctccaatgtttcatgagaagccacataattacattttaataaattcctttctcaagc 620
Query: 421 acacaatatcctgcccttaactattattgttacaaattattcaagattgtacaaatggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacaatatcctgcccttaactattattgttacaaattattcaagattgtacaaatggta 680
Query: 481 tttttaggaaa 491
|||||||||||
Sbjct: 681 tttttaggaaa 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_c04.g1 MSMg01no109_c04.g1 CHROMAT_FILE:
MSMg01no109_c04.g1 PHD_FILE: MSMg01no109_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:14 2005
(233 letters)
>mm_chr2_111544517_111545149
Length = 633
Score = 451 bits (233), Expect = e-131
Identities = 233/233 (100%)
Strand = Plus / Minus
Query: 1 actacagctgggatcacctctaaacaccctgtgcatgactgtcaacattcctgcagcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 actacagctgggatcacctctaaacaccctgtgcatgactgtcaacattcctgcagcagg 255
Query: 61 tttaagcagattcctgatcctgcctgaggattagcacacagcttgtttctggagggggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttaagcagattcctgatcctgcctgaggattagcacacagcttgtttctggagggggga 195
Query: 121 agcaaaatggcccaaaggtaaaggcacctgatgatgtcaactcagtccctgggatctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 agcaaaatggcccaaaggtaaaggcacctgatgatgtcaactcagtccctgggatctagg 135
Query: 181 tggtagagagaactgactggcacaagttgtcatcttggcaggggctgagcaga 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tggtagagagaactgactggcacaagttgtcatcttggcaggggctgagcaga 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
