CTAACACCTACTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCAA
GAGAATCCGCGGAATTCCTCTACTCTCGAACATCAAGCCTTCACAGGACC
AAGGGCCTCCCCTCCCATTGATGCCAAATAAGGCCCCTTCAGCTCCTTCA
GTCCTTCCCCAAACTCCTCCATTGGGGTACCTGTGCTTAGTCCAAAGGTT
GGCTGTGAGCATCCACTTCTGTATTGTCAGGATCTGGCAGAGCCTCTCAG
GAGAAAAATGTATCAGGCTCCTGTCAACAAGCACCTCTTGGTATCCTGAT
CAGAAGGCAGCCAGGAGAGGACTGTCTGCTGTGTGTAGCCAGGAGGAGAT
TCTCATTCCACATTGGGTGGAGCCTGGGCATTGCAGCCTCAAAGCCCACC
CACCACAGTGACACATTTCCTCTGACAAGGCCACACCTACTCCAACATCA
CCACACTTCCCAATAGTGCCACTATCTATGGTCAAGCATTCAAACAACCC
CAACCACAACCACACACAGGAAATAGTCAAAGACTCAAGCAACATAACCA
CTCTCTCCGCTTATTTCTAAAAGCTAAGGTACAACTCCATGCCAGATAAC
CCTGGGCTAAAAGCATGACCCTTAAGGAATGGCTTTTCAGTGCCAGTTTC
CCCAATTAGCACTGGGTTACAGTCTCCGGTAGGACATGCTAGAATTCCCT
GCAAAGAGAGAACTCTATAATCCAACA

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCCCCAGGCTGCCCCTTGGGTTACT
CTCTACCTTTAGTAGCTGGTCTCTTCCTCACTAGGGGAGTTAGAAAGAAC
AATAGCCATGCTGTTACTGATCCCAGAAATCGATAAAGTCCAGCAATGAA
TATGCAAATAAGGCCACTCATGGTTTCCCTATACCCTGTCCATACGTATA
AAAAAGATTCAATTAATGCTGTGTGTGTATAAAAATTAAAATTTCAGGTT
AATTTCACATAGTAGTATATGCAAAATAACTAATAAAATGTTACCAATTA
TGATGTATGTTTAAAGTAAAAAGATGGGAGGTATCTCTATTCATCCTCAC
AGCAAGGCTGCTCATGATTAATTTTAATGTTGTTCTAGAAAGGTTGATAA
TAAAAGGAAGAGAGAGAGAGAGAATATTGAAGAACACACAAAATTTCAAT
AATTGCAAGCAAGCAATATCAGTTCCCATTGTGAATATCTATAGGAATTA
ATTACAAAGTATAAGAACAATAAAAAAAACATTCAGCTTGGTGATTTTTA
AATAAATACAGAGACAGGTGTGTTAGCACACTCCTGTGATCCCACAATTT
GGGAGGAGCTGGCAAGAGGATTAACAACTCAAGGTCTCCCTGGGCTACAA
AGTGAATTTGAGGTC

Query= MSMg01no110_j09.g1 MSMg01no110_j09.g1 CHROMAT_FILE:
MSMg01no110_j09.g1 PHD_FILE: MSMg01no110_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:13 2005
         (513 letters)



>mm_chr2_161183405_161184319
          Length = 915

 Score =  969 bits (501), Expect = 0.0
 Identities = 511/515 (99%), Gaps = 2/515 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccccaggctgccccttgggttactctctacctttagtagctggtctcttcctcactag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccccaggctgccccttgggttactctctacctttagtagctggtctcttcctcactag 260

                                                                       
Query: 61  gggagttagaaagaacaatagccatgctgttactgatcccagaaatcgataaagtccagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gggagttagaaagaacaatagccatgctgttactgatcccagaaatcgatatagtccagc 320

                                                                       
Query: 121 aatgaatatgcaaataaggccactcatggtttccctataccctgtccatacgtataaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaatatgcaaataaggccactcatggtttccctataccctgtccatacgtataaaaa 380

                                                                       
Query: 181 agattcaattaatgctgtgtgtgtataaaaattaaaatttcaggttaatttcacatagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattcaattaatgctgtgtgtgtataaaaattaaaatttcaggttaatttcacatagta 440

                                                                       
Query: 241 gtatatgcaaaataactaataaaatgttaccaattatgatgtatgtttaaagtaaaaaga 300
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 gtatatgcaaaataactaataaaatgttatcaattatgatgtatgtttaaagtaaaaaga 500

                                                                       
Query: 301 tgggaggtatctctattcatcctcacagcaaggctgctcatgattaattttaatgttgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggaggtatctctattcatcctcacagcaaggctgctcatgattaattttaatgttgtt 560

                                                                       
Query: 361 ctagaaaggttgataataaaaggaagagagagagagaga--atattgaagaacacacaaa 418
           |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 561 ctagaaaggttgataataaaaggaagagagagagagagagaatattgaagaacacacaaa 620

                                                                       
Query: 419 atttcaataattgcaagcaagcaatatcagttcccattgtgaatatctataggaattaat 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttcaataattgcaagcaagcaatatcagttcccattgtgaatatctataggaattaat 680

                                              
Query: 479 tacaaagtataagaacaataaaaaaaacattcagc 513
           |||||||||||||||||||||||||||||||||||
Sbjct: 681 tacaaagtataagaacaataaaaaaaacattcagc 715


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 915
Length adjustment: 10
Effective length of query: 503
Effective length of database: 905
Effective search space:   455215
Effective search space used:   455215
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)