Query= MSMg01no115_b11.b1 MSMg01no115_b11.b1 CHROMAT_FILE:
MSMg01no115_b11.b1 PHD_FILE: MSMg01no115_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:57 2005
(394 letters)
>mm_chr2_49708735_49709527
Length = 793
Score = 710 bits (367), Expect = 0.0
Identities = 384/395 (97%), Gaps = 11/395 (2%)
Strand = Plus / Plus
Query: 5 gaattccatgcggtatacgtaccatatttgcattatccttccatctgttgatggatgtct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgcggtatacgtaccatatttgcattatccttccatctgttgatggatgtct 264
Query: 65 gtgttgattctatttcctagatattgtggatagaacagttaccaacatggttgaacaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgttgattctatttcctagatattgtggatagaacagttaccaacatggttgaacaaaa 324
Query: 125 ttcttcataataacataaagagtcttttggggatatgccctaaagtggtaaccaggtcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttcataataacataaagagtcttttggggatatgccctaaagtggtaaccaggtcct 384
Query: 185 gtgagccatgcactgcatgttctcatatgcccatcttagtatctggtcttgtatgtatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgagccatgcactgcatgttctcatatgcccatcttagtatctggtcttgtatgtatgc 444
Query: 245 atttgtgtgggtgtgactgtatgaagatggtagggaattagaaagaggcccatgaaagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttgtgtgggtgtgactgtatgaagatggtagggaattagaaagaggcccatgaaagga 504
Query: 305 gagggggaaagagtttagggaagagaaatataaaggatagcagcaccacttgtggtgtga 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 gagggggaaagagtttagggaagagaaatataaaggatagcagcac-acttgtggtgtga 563
Query: 365 aaattaccccc-----gaacattggggagagaggg 394
|||||| |||||||||||||||||||
Sbjct: 564 aaatta-----agggggaacattggggagagaggg 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 793
Length adjustment: 9
Effective length of query: 385
Effective length of database: 784
Effective search space: 301840
Effective search space used: 301840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_b11.g1 MSMg01no115_b11.g1 CHROMAT_FILE:
MSMg01no115_b11.g1 PHD_FILE: MSMg01no115_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:57 2005
(593 letters)
>mm_chr2_49848597_49849589
Length = 993
Score = 567 bits (293), Expect = e-165
Identities = 305/309 (98%)
Strand = Plus / Minus
Query: 285 gttgtgaatactttgcatatgcctattttagaatatatttttatattttttgggtaaaca 344
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 993 gttgtgaatactttgcatatgcctattttagaatatatttttatattttttgggtaaata 934
Query: 345 ccaactaatgggattgctgtctgaaggcagatgtatgtttaacttataaattaccatcat 404
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 tcaactaatgggattgctgtctgaaggcagatgtatgtttaacttataaattaccatcat 874
Query: 405 aatttcttactgtagtttttccatcttaatgtctgtgtggaactatgcaagagtaccagc 464
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aatttcttactgtagtgtttccatcttaatgtctgtgtggaactatgcaagagtaccagc 814
Query: 465 tcttcctcatctttctccaaaactgacattcttaagttagtttattttgtaattaaccat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tcttcctcatctttctccaaaactgacattcttaagttagtttattttgtaattaaccat 754
Query: 525 ggtactttataaggtaaaatatgatgtgtcaatatagacatatgtattcaagttatcttt 584
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 753 ggtactttataaggtaaaatatgatgtgtcaatatagacatatgtatttaagttatcttt 694
Query: 585 ctattccag 593
|||||||||
Sbjct: 693 ctattccag 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
