Query= MSMg01no115_n14.b1 MSMg01no115_n14.b1 CHROMAT_FILE:
MSMg01no115_n14.b1 PHD_FILE: MSMg01no115_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:54 2005
(119 letters)
>mm_chr2_134781000_134781518
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 5 gaattctcccggagtcagaccactgtagtacttcattcttgtaagacagtacagtattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaattctcccggagtcagaccactgtagtacttcattcttgtaagacagtacagtattaa 260
Query: 65 taaaagaatgtatactactaacttagcaaaattattaggatggtacagtactgct 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taaaagaatgtatactactaacttagcaaaattattaggatggtacagtactgct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no115_n14.g1 MSMg01no115_n14.g1 CHROMAT_FILE:
MSMg01no115_n14.g1 PHD_FILE: MSMg01no115_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:54 2005
(614 letters)
>mm_chr2_134715334_134716346
Length = 1013
Score = 1149 bits (594), Expect = 0.0
Identities = 609/614 (99%), Gaps = 1/614 (0%)
Strand = Plus / Plus
Query: 1 tggactcactccacctagtaggctgcaatttttaagtgtgatttttcccaatgtatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggactcactccacctagtaggctgcaatttttaagtgtgatttttcccaatgtatcctt 260
Query: 61 caaccagaaattaatgggtcgcaattggtgatcagagtttgttctccgtttctagtgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaccagaaattaatgggtcgcaattggtgatcagagtttgttctccgtttctagtgaac 320
Query: 121 atctaagtgatcaatccctgttcattagaatgtttgcttttcctccttacatttccccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctaagtgatcaatccctgttcattagaatgtttgcttttcctccttacatttccccat 380
Query: 181 aaatgacaaatttcagtgcttttatatggttatatctatttctagattttttttgaacta 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aaatgacaaatttcagtgcttttatatggttatatctatttctaga-tttttttgaacta 439
Query: 241 ctgaactattcttatacccatataagcctgaatgtaattacccctgagtgtcctgaattt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgaactactcttatacccatataagcctgaatgtaattacccctgagtgtcctgaattt 499
Query: 301 gcccttaagctaaaaatccccagtttaaataagtcaaaattcaaaccatgtcctaaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcccttaagctaaaaatccccagtttaaataagtcaaaattcaaaccatgtcctaaatga 559
Query: 361 ataaggaatttactttcagaaaggaaagtgcaagtgtttgcgttgccagccagttgtgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ataaggaatttactttcagaaaggaaagtgcaagtgtttgcgttgccagccagttgtgtc 619
Query: 421 tctgcacactccatattaatattgatatcagtatattaatagcttattacatgaagagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctgcacactccatattaatattgatatcagtatattaatagcttattacatgaagagtg 679
Query: 481 tgtttgctgtgaaatagcgtgcagctctgagatgatttaagagaattttttgttctttag 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtttgctgtgaaatagtgtgcagctctgagatgatttaagagaattttttgttctttag 739
Query: 541 agtcttcaccttgctaggcatactgtatctactaccactgtaaccttgatggctgtctac 600
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 740 aatcttcaccttgctaggcatactgtatctactaccactgtaactttgatggctgtctac 799
Query: 601 gactttttctagaa 614
||||||||||||||
Sbjct: 800 gactttttctagaa 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
