Query= MSMg01no116_m03.b1 MSMg01no116_m03.b1 CHROMAT_FILE:
MSMg01no116_m03.b1 PHD_FILE: MSMg01no116_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:06 2005
(207 letters)
>mm_chr2_167741507_167742113
Length = 607
Score = 387 bits (200), Expect = e-112
Identities = 203/204 (99%)
Strand = Plus / Plus
Query: 1 ttaattttgtcagaagatgccagccttcctagtggtgtctctaccacaagctgcagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaattttgtcagaagatgccagccttcctagtggtgtctctaccacaagctgcagtgaa 260
Query: 61 ccctgtttgcagaacccagcatctataactcacctggtgctgctgccaatgccacaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctgtttgcagaacccagcatctataactcacctggtgctgctgccaatgccacaggga 320
Query: 121 agaccaaaccttccaggaacaggccagggagtaaatcagcatgtgtgtgtgtgtgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccaaaccttccaggaacaggccagggagtaaatcagcatgtgtgtgtgtgtgtgtgt 380
Query: 181 gtgtgtgtgtgtgtgcgtgtgtgt 204
||||||||||||||| ||||||||
Sbjct: 381 gtgtgtgtgtgtgtgtgtgtgtgt 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no116_m03.g1 MSMg01no116_m03.g1 CHROMAT_FILE:
MSMg01no116_m03.g1 PHD_FILE: MSMg01no116_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:06 2005
(237 letters)
>mm_chr2_167922188_167922823
Length = 636
Score = 414 bits (214), Expect = e-120
Identities = 232/238 (97%), Gaps = 3/238 (1%)
Strand = Plus / Minus
Query: 1 aggagaggaaaatggttggggtgtggcgggggtggggtgggagcccttgccctgaactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aggagaggaaaatggttggggtgtggcgggggtggggtgggagcccttgccctgaactag 377
Query: 61 tgaggctttgggttccttttcagctccagcagctggaagggtgggagggaagaggggcag 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgaggccctgggttccttttcagctccagcagctggaagggtgggagggaagaggggcag 317
Query: 121 acgccttcctctgcactcacagcttcattactaagcgaatgcttagta-ggcttgtctct 179
||||||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 316 acgccttcctccgcactcacagcttcattactaag-gaatgcttag-acggcttgtctct 259
Query: 180 cagcaaataaactcccttcagccccgtgggctctgactctcactccccactctggcag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cagcaaataaactcccttcagccccgtgggctctgactctcactccccactctggcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 636
Length adjustment: 9
Effective length of query: 228
Effective length of database: 627
Effective search space: 142956
Effective search space used: 142956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
