Query= MSMg01no117_l18.b1 MSMg01no117_l18.b1 CHROMAT_FILE:
MSMg01no117_l18.b1 PHD_FILE: MSMg01no117_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:23 2005
(579 letters)
>mm_chr2_61604522_61605501
Length = 980
Score = 969 bits (501), Expect = 0.0
Identities = 510/513 (99%), Gaps = 1/513 (0%)
Strand = Plus / Minus
Query: 3 ggaattctttattttta-acattatattgttgcatttcatgatttaaataaaatatctca 61
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggaattctttatttttataaattatattgttgcatttcatgatttaaataaaatatctca 454
Query: 62 cggatttattagcatttagttgatttgtagcgtcaaaaactcttgacaattaaaaagtaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cggatttattagcatttagttgatttgtagcgtcaaaaactcttgacaattaaaaagtaa 394
Query: 122 taaattacaaccaaactcggatgccatacagatggactatatactgacaaagacgtgttc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 taaattacaaccaaactcggatgccatacagatggactatatactgacaaagacgtgttc 334
Query: 182 atacagtacaggtaacataactgtatgaatttgagtataacaggcagtagggatcactga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atacagtacaggtaacataactgtatgaatttgagtataacaggcagtagggatcactga 274
Query: 242 ctgtatataattacattttaaaaattcaatgatattttatgacttaataaagctaagtaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctgtatataattacattttaaaaattcaatgatattttatgacttaataaagctaagtaa 214
Query: 302 taatacatatgattttataaagtaattttacatatttttttaaattacaaaatagtcaag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 taatacatatgattttataaagtaattttacatatttttttaaattacaaaatagtcaag 154
Query: 362 tcctttgctatgaatatagtttcaaatatcattttcatatgaattacaactaataaaaac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tcctttgctatgaatatagtttcaaatatcattttcatatgaattacaactaataaaaac 94
Query: 422 taatgggaattcgatattacacaatactttaatgcaagtttagaagctaaaattgctctc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 taatgggaattcgatattacacaatactttaatgcaagtttagaagctaaaattgctctc 34
Query: 482 tagaattatacttcagagaaaagccataaataa 514
||||||||||||||||||| |||||||||||||
Sbjct: 33 tagaattatacttcagagataagccataaataa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_l18.g1 MSMg01no117_l18.g1 CHROMAT_FILE:
MSMg01no117_l18.g1 PHD_FILE: MSMg01no117_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:23 2005
(251 letters)
>mm_chr2_61452300_61452950
Length = 651
Score = 478 bits (247), Expect = e-139
Identities = 250/251 (99%)
Strand = Plus / Plus
Query: 1 actaaagagtcacagttatttgggttttgttgttatttttgaattcagagctgtccttat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 actaaagagtcacagttatttgggttttgttgttatttttgaattcagagttgtccttat 260
Query: 61 agatactgtgtcaaccaaaagtccaaactcaggacaagtagatccactgtaagtgttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatactgtgtcaaccaaaagtccaaactcaggacaagtagatccactgtaagtgttact 320
Query: 121 atactgtctaaataagctgagacagcagtcacagtcttactacataggaatggtgtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactgtctaaataagctgagacagcagtcacagtcttactacataggaatggtgtgaaa 380
Query: 181 ggccattttcccaagtaatatcaaaggaccgattttgcaagtaagcctttatgaaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggccattttcccaagtaatatcaaaggaccgattttgcaagtaagcctttatgaaaataa 440
Query: 241 cagtcacagat 251
|||||||||||
Sbjct: 441 cagtcacagat 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
