Query= MSMg01no118_f13.b1 MSMg01no118_f13.b1 CHROMAT_FILE:
MSMg01no118_f13.b1 PHD_FILE: MSMg01no118_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:10 2005
(235 letters)
>mm_chr2_137142750_137143384
Length = 635
Score = 449 bits (232), Expect = e-131
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 1 actcttaggaagattaaatattcagagtctgtgccaactgataaaagtcattgactcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcttaggaagattaaatattcagagtctgtgccaactgataaaagtcattgactcttt 260
Query: 61 ctgggactcagttttctcatcgttaagtcaggaaagttggacctcccaacagggctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggactcagttttctcatcgttaagtcaggaaagttggacctcccaacagggctcctt 320
Query: 121 gttgcaactgtctgggactcctctgtagtgttggagtgaactaggaacacaagctctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgcaactgtctgggactcctctgtagtgttggagtgaactaggaacacaagctctaca 380
Query: 181 gcccagtggctgacactcttctgtgcctccatttcctcctgtgaaaaggagg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccagtggctgacactcttctgtgcctccatttcctcctgtgaaaaggagg 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_f13.g1 MSMg01no118_f13.g1 CHROMAT_FILE:
MSMg01no118_f13.g1 PHD_FILE: MSMg01no118_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:10 2005
(479 letters)
>mm_chr2_137284310_137285189
Length = 880
Score = 890 bits (460), Expect = 0.0
Identities = 475/480 (98%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 1 aatgaaagataaataactagaatggtaatagtctagtgaatctgcaagcagagttcgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatgaaagataaataactagaatggtaatagtctagtgaatctgcaagcagagttcgaaa 621
Query: 61 cctatcagttggctctgatataagatttatgtccttcattctaataaaaggtttgttctg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 cctatcagttggctctgatataagattcatgtccttcattctaataaaaggtttgttctg 561
Query: 121 cctggaggggagaaaagggaccaactaaatgcagtgggtggatactccc-ccccccaccc 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 cctggaggggagaaaagggaccaactaaatgcagtgggtggatactccctccccccaccc 501
Query: 180 cccagtagctactgacttctggcatcacacattaacattgcctagttaaggatgggcccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cccagtagctactgacttctggcatcacacattaacattgcctagttaaggatgggcccc 441
Query: 240 tgtaaagacatctagatatagagaatgagttgtgactgaggatatagggctctggtactc 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 tgtaaagacatctagatatagagaatgagttgtgactgaggatagagggctctggtactc 381
Query: 300 cagccccacacatcacaaggcttcaaccagtactgctgccattctccttatggctctgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagccccacacatcacaaggcttcaaccagtactgctgccattctccttatggctctgaa 321
Query: 360 gacagcagaaggaaaagttatggagagaatataagttttggtatggaaccagtgctggtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacagcagaaggaaaagttatggagagaatataagttttggtatggaaccagtgctggtt 261
Query: 420 gactgatgtgcactcctttcctgaaggcatccaaggtcttatatggtttccttgtcataa 479
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 gactgatgtgcaatcctttcctgaaggtatccaaggtcttatatggtttccttgtcataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
