Query= MSMg01no118_i02.b1 MSMg01no118_i02.b1 CHROMAT_FILE:
MSMg01no118_i02.b1 PHD_FILE: MSMg01no118_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:22 2005
(149 letters)
>mm_chr2_112293063_112293609
Length = 547
Score = 269 bits (139), Expect = 6e-77
Identities = 146/149 (97%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 ctaacctcaaacttgtggcagttttcctgtctcaacctccctagtgctagagctagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctaacctcaaacttgtggcagttttcctgtctcaacctccctagtgctagagctagtgct 288
Query: 61 gctcttgactgtaaattatcccaatggtatataaataagtttcctcattcttaaaataag 120
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 287 gctcttggctgtaaattatcccaatggtatataaat--gtttcctcattcttaaaataag 230
Query: 121 gctaccaagtaccccagtatatagatttc 149
|||||||||||||||||||||||||||||
Sbjct: 229 gctaccaagtaccccagtatatagatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 547
Length adjustment: 8
Effective length of query: 141
Effective length of database: 539
Effective search space: 75999
Effective search space used: 75999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_i02.g1 MSMg01no118_i02.g1 CHROMAT_FILE:
MSMg01no118_i02.g1 PHD_FILE: MSMg01no118_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:22 2005
(274 letters)
>mm_chr2_112119569_112120242
Length = 674
Score = 522 bits (270), Expect = e-153
Identities = 273/274 (99%)
Strand = Plus / Plus
Query: 1 attgctcctcactgaggattcccagtgagcacaatactttcataaagctttatcttgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgctcctcactgaggattcccagtgagcacaatactttcataaagctttatcttgtgt 260
Query: 61 ggtgtgtggtcatatgtgtataagttaatgagagaattctgggaacaggtaggtgtatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgtgtggtcatatgtgtataagttaatgagagaattctgggaacaggtaggtgtatgc 320
Query: 121 agatgaagactgcacagtgtgggctcatgatatctagtctgttgtatctgtattctgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 agatgaagactgcacagtgtgggctcatgatatctagtctgttgtatctgtgttctgatc 380
Query: 181 ttaaaatgtttttatttttactgtgtatgtattgctattttacctgtatgtatgcctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaaatgtttttatttttactgtgtatgtattgctattttacctgtatgtatgcctgtg 440
Query: 241 tgccatgtatgtatctgatgcccagggaggtcag 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccatgtatgtatctgatgcccagggaggtcag 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
