Query= MSMg01no118_m18.b1 MSMg01no118_m18.b1 CHROMAT_FILE:
MSMg01no118_m18.b1 PHD_FILE: MSMg01no118_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:45 2005
(659 letters)
>mm_chr2_138683647_138684706
Length = 1060
Score = 1195 bits (618), Expect = 0.0
Identities = 645/654 (98%), Gaps = 3/654 (0%)
Strand = Plus / Minus
Query: 7 attcctcacctatct-catcctttgaagaaaagagaaaaagaagtg-agatgggtatttt 64
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 859 attcctcacctatctgtatcctttgaagaaaagagaaaaagaagtgtagatgggtatctt 800
Query: 65 ctattgtttctgtcctaaatcttcctttctgttggtgcttctgctagacaatcagagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctattgtttctgtcctaaatcttcctttctgttggtgcttctgctagacaatcagagaac 740
Query: 125 tatgcaatcctttaaattgcagaaaacctggggaaagagttggaggcacaaatcagtaaa 184
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 739 tatgcaatcctttaaatttcagaaaacctggggaaagaactggaggcacaaatcagtaaa 680
Query: 185 gagtgtgtgaaggtccacttctaaaggttgttccatagtgtagtgcttcttttatggtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gagtgtgtgaaggtccacttctaaaggttgttccatagtgtagtgcttcttttatggtgg 620
Query: 245 gaaaaaaatagactcattgaatggggatttgattttatttaaataaacatcgatttcccc 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 g-aaaaaatagactcattgaatggggatttgattttatttaaataaacatcgatttcccc 561
Query: 305 attcaattataatgttggcaggagcccacatcccacaacaaagtccatatttaaatattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attcaattataatgttggcaggagcccacatcccacaacaaagtccatatttaaatattt 501
Query: 365 taagcacctcaatcatgcttaatggaatggaaaagccctcatacttctacagaaccatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taagcacctcaatcatgcttaatggaatggaaaagccctcatacttctacagaaccatat 441
Query: 425 tcatctgcagcaagcagataacacatttgcagctaaaagattatgtcaaatacaatccta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatctgcagcaagcagataacacatttgcagctaaaagattatgtcaaatacaatccta 381
Query: 485 tatttaggtgccctagcaggtcaaagatgtacagataactgcttctacagctgacattcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tatttaggtgccctagcaggtcaaagatgtacagataactgcttctacagctgacattcc 321
Query: 545 atcaaatcttctctgttatagttagccagtcctgccacttatgatattcaaattcttttc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcaaatcttctctgttatagttagccagtcctgccacttatgatattcaaattcttttc 261
Query: 605 caattctactccaaatgtaccaggctagactgaagttaggttctaacatagttg 658
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caattctattccaaatgtaccaggctagactgaagttaggttctaacatagttg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_m18.g1 MSMg01no118_m18.g1 CHROMAT_FILE:
MSMg01no118_m18.g1 PHD_FILE: MSMg01no118_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:45 2005
(628 letters)
>mm_chr2_138613359_138614386
Length = 1028
Score = 1183 bits (612), Expect = 0.0
Identities = 624/628 (99%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 tcctggtctgtctacgtggtttctccacacctttttatcctcttctctccctttgttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcctggtctgtctacgtggtttctccacacctttttatcctcttctctccctttgttctt 261
Query: 61 cctctctggtctcttcaaattcccctgacttggattggaagtcttgtactatattctctt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctctctggtctcttcaaatccccctgacttggattggaagtcttgtactatattctctt 321
Query: 121 tttgccagctatcagctaaatcagctctttattactcaatctgagatgatggaaaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tttgccagctatcagctaaatcagctctttattactcaatctgagatgatggaaaacatt 381
Query: 181 tttttttacataacatttgagaagggagatgtttgaccatgccaacatccaactgcaaac 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttttt-acataacatttgagaagggagatgtttgaccatgccaacatccaactgcaaac 440
Query: 241 agatgcctggcatagaaatcagcatctgaatacacagtgcacaaaaccatcccctaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatgcctggcatagaaatcagcatctgaatacacagtgcacaaaaccatcccctaacaa 500
Query: 301 tcatcagaagtgaaaatgtgggtctttggccaggatgccatgaattttcatgaagactta 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tcatcagaagtgaaaatgtgggtctttgaccaggatgccatgaattttcatgaagactta 560
Query: 361 acacagcagttaagggtcgtgccttttgaagtgacctcagcaaagaagagcagcacctaa 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 acacagcagttaagggtcgtgccttttgaagtgacctcagcacagaagagcagcacctaa 620
Query: 421 gagagaaagcaaagttcattcagtatggacaaaatgggatgaagaaccagccggcaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagagaaagcaaagttcattcagtatggacaaaatgggatgaagaaccagccggcaaatc 680
Query: 481 attttaatcaggcattttacagttgctagtatttcctgacatcaaatgacagtctgatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attttaatcaggcattttacagttgctagtatttcctgacatcaaatgacagtctgatca 740
Query: 541 cccagtgagcaattagaataatctcaccattacttttgagttatcactgttgtaaagctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccagtgagcaattagaataatctcaccattacttttgagttatcactgttgtaaagctc 800
Query: 601 ttgctaattttttttaaagcaaaaaaaa 628
||||||||||||||||||||||||||||
Sbjct: 801 ttgctaattttttttaaagcaaaaaaaa 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
