Query= MSMg01no119_a06.b1 MSMg01no119_a06.b1 CHROMAT_FILE:
MSMg01no119_a06.b1 PHD_FILE: MSMg01no119_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:02 2005
(628 letters)
>mm_chr2_59955869_59956896
Length = 1028
Score = 1207 bits (624), Expect = 0.0
Identities = 627/628 (99%)
Strand = Plus / Minus
Query: 1 ggaccttagaacggaacaagtacaaatggttgtatcgtatctgcaaaatatttaattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ggaccttagaacggaacaagtacaaatggttgtatcgtatctgcaaaatatttaattttg 769
Query: 61 tctaaaatccagccagctgcctaaagaaatctaaattatacaactattaaaatattgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tctaaaatccagccagctgcctaaagaaatctaaattatacaactattaaaatattgggt 709
Query: 121 aataagattttataattttgttcagataaaaaaccaagctgattttacttaagaattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aataagattttataattttgttcagataaaaaaccaagctgattttacttaagaattcta 649
Query: 181 ttgtttactaatagtttaactaacagttacaaatagtttgagacacaatagattatcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttgtttactaatagtttaactaacagttacaaatagtttgagacacaatagattatcaat 589
Query: 241 tactttgtaaaatattgtcttcttacgtagaaaggaggtagtacttttagctcgtaggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tactttgtaaaatattgtcttcttacgtagaaaggaggtagtacttttagctcgtaggta 529
Query: 301 gtgtgaaagcaagatgagaggcagctgacaggcctttaactgggttagaataatgtgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtgtgaaagcaagatgagaggcagctgacaggcctttaactgggttagaataatgtgaag 469
Query: 361 gctatacagctacagctactctagttgctggaaggaccagtgagcagtcctacacgttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gctatacagctacagctactctagttgctggaaggaccagtgagcagtcctacacgttct 409
Query: 421 aaaaggtacctgttactacagctctcctaacctcctgtacgtggctgtcacttgtaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaaaggtacctgttactacagctctcctaacctcctgtacgtggctgtcacttgtaacta 349
Query: 481 agtagagaaaaggaaacaacctgagcaccccaagcttccagtcagagtgggaggaacccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agtagagaaaaggaaacaacctgagcaccccaagcttccagtcagagtgggaggaacccg 289
Query: 541 tggcaaatgctcgtgtgtttatccttttcggggcgacaaggaggagcacattgctttgta 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 288 tggcaaatgctcgtgtgtttatccttttcggggcgacaaggaggagcgcattgctttgta 229
Query: 601 tgtgttaagataaatgcatacccgaggg 628
||||||||||||||||||||||||||||
Sbjct: 228 tgtgttaagataaatgcatacccgaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_a06.g1 MSMg01no119_a06.g1 CHROMAT_FILE:
MSMg01no119_a06.g1 PHD_FILE: MSMg01no119_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:02 2005
(450 letters)
>mm_chr2_59826865_59827714
Length = 850
Score = 578 bits (299), Expect = e-169
Identities = 396/465 (85%), Gaps = 58/465 (12%)
Strand = Plus / Plus
Query: 1 tttagttcatatggacagaacatttttccacaaataatcttcatttcattcttgtattct 60
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagttcgtgtggacagaacatttttccacaaataatcttcatttcattcttgtattct 260
Query: 61 cttatttggagccactgcagccttatgtcttaatatttagaaagatgtatggaatacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttatttggagccactgcagccttatgtcttaatatttagaaagatgtatggaatacaag 320
Query: 121 tagattctagtcattcatttattttctttcttttttttttttttttttttttttttttta 180
|||||||||||||||| |
Sbjct: 321 tagattctagtcattc-------------------------------------------a 337
Query: 181 tttattttctttcttgagacaggaattcataacgtatcacacactagccttggactcagt 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 338 tttattttctttcttgagacaggaattcataacgtagcacacactagccttggactcagt 397
Query: 241 atgtggttta-------aac--------tgccaatgtcctggagcctttctgcttcagtg 285
|||||| ||| || ||||||||| ||||||||||||||||||||||
Sbjct: 398 atgtggcttagttcttggacttagtatgtgccaatgttctggagcctttctgcttcagtg 457
Query: 286 tctcaactcagggattacaacatgcatgaccaacctagctcatttttatttaagcactta 345
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 458 tctcaactcagggattacaacatgcatgaccaacctagcttatttttatttaagtactta 517
Query: 346 ttctgagattattttacaatcccaaaaactgaaaaagtaacagcaagtccctatgttcct 405
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttctgagattattttataatcacaaaaactgaaaaagtaacagcaagtccctatgttcct 577
Query: 406 tttccatagcccctcctatgctaatattttacatacaactataga 450
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 578 tttccatagcccctcctatgctaatatcttacatacaactataga 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
