Query= MSMg01no120_e07.b1 MSMg01no120_e07.b1 CHROMAT_FILE:
MSMg01no120_e07.b1 PHD_FILE: MSMg01no120_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:39 2005
(628 letters)
>mm_chr2_56864174_56865201
Length = 1028
Score = 982 bits (508), Expect = 0.0
Identities = 529/538 (98%), Gaps = 4/538 (0%)
Strand = Plus / Minus
Query: 91 tgttctctcagaggaatagcattcgattctaggcatccattagatggtttacaaccatct 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 tgttctctcagaggaatagcattcgattctaggcatccattagatggtttacaaccatct 969
Query: 151 actactccagatccaggggatgctcacttctgacttcctcaggcaccatttatgcatatg 210
| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 968 agtactccagatccagggggtgctcacttctgacttcctcaggcaccattcatgcatatg 909
Query: 211 gtgcatacatacctacatacatgcatgcatgcatgcatgcatgcatacatacatacatgt 270
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 908 gtgcatacatacctacata----catgcatgcatgcatgcatgcatacatacatacatgt 853
Query: 271 tggcaaaacactcacataaaataatatgcatacatgtaattaaaacattcaaaatatgtg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tggcaaaacactcacataaaataatatgcatacatgtaattaaaacattcaaaatatgtg 793
Query: 331 actgcaaatgatacacagtgtaaaatagattcacggttgtttctcgtccattacatgaag 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 actgcaaatgatacacagtgtaaaatagattcacggttgtttctcgtccattacatgaag 733
Query: 391 atgtttgaagaacattgtcaggcttaggttgacccaattaaatcctaatcagaaattagt 450
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 732 atgtttgaagaacattgtcaggcttaggttgacccaactaaatcctaatcagaaattaat 673
Query: 451 aatatgagccaagtgcagagaacatctacagcacataactcctttaagctactcattggg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aatatgagccaagtgcagagaacatctacagcacataactcctttaagctactcattggg 613
Query: 511 cacaagagtctgtgctacatcatgagcaagagtcattgagaattgtttgaccatggtcct 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cacaagagtctgtgctacatcatgagcaagagtcattgagaattgtttgaccatggtcct 553
Query: 571 gctgttgcagagatatctcgatgcttaaactaactaggcaaaagtagtaattgtgctc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gctgttgcagagatatctcgatgcttaaactaactaggcaaaagtagtaattgtgctc 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_e07.g1 MSMg01no120_e07.g1 CHROMAT_FILE:
MSMg01no120_e07.g1 PHD_FILE: MSMg01no120_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:39 2005
(630 letters)
>mm_chr2_56700923_56701952
Length = 1030
Score = 1195 bits (618), Expect = 0.0
Identities = 627/630 (99%)
Strand = Plus / Plus
Query: 1 catgagggatttaatcacagggaatcagaatatttactgcagcattaatttatcatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgagggatttaatcacagggaatcagaatatttactgcagcattaatttatcatgttg 260
Query: 61 cctgagacaactagcatcttcatgttgtaactgtttccactcagtgattgagggaagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgagacaactagcatcttcatgttgtaactgtttccactcagtgattgagggaagaat 320
Query: 121 tcattaaattttcaacatttgttgtctgaatcatgctcaaatgagtacttgcctctgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcattaaattttcaacatttgttgtctgaatcatgctcaaatgagtacttgcctctgatt 380
Query: 181 ttggaaacagtcatcagctaaagaagggtaggcattggtagatgtaagacttaatgagag 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ttggaaacagtcatcagctaaagaagggtaggcattggtagatttaagacttaatgagag 440
Query: 241 aggaaaagacaaagacggagagagagagagtcactgacagaatatgttaaaatatgttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaaaagacaaagacggagagagagagagtcactgacagaatatgttaaaatatgttca 500
Query: 301 ctctacttaaaactctaccttcagctggcttcatgaataacatagtccttgggttttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctacttaaaactctaccttcagctggcttcatgaataacatagtccttgggttttgtt 560
Query: 361 ttgttttgttttggtctcctcagactcctttgggttttccttcccatcttcccaacagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgttttgttttggtctcctcagactcctttgggttttccttcccatcttcccaacagat 620
Query: 421 gcgtgtccctttcctatccatatattgtcccaacacaatcttacctagtttatacatact 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgtgtccctttcctatccatatattgtcccaacacaatcttacctagtttatacatact 680
Query: 481 ggtgccatcaaaggtgcacctttagcctctatctttcccttgatatctaactatagctat 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtgccatcaaagttgcacctttagcctctatctttcccttgatatctaactatagctat 740
Query: 541 caaattacattagttgtaataaaaatgttttgaaagtctatttaattatcaatagcatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaattacattagttgtaataaaaatgttttgaaagtctatttaattatcaatagcatct 800
Query: 601 aaaaaatattatacaaagactttgtaaatc 630
||||||||||||||||||||||||||||||
Sbjct: 801 aaaaaatattatacaaagactttgtaaatc 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
