NCCGTATATTNNNTAACAGTGGGCGCTATAGACTCCTATAGGGAGAGGAT
CCGCGGAATTCTTTGGTGACCTAGCTCATACAGTACCAGAACAGCACAAG
ACTGGATCTGAGTGGCCTGTATCTGAGTGTGAAACAGTAATGGGGAGACT
AGAGAGGCATCCAGTGTCTACAGGCAGCTCTTTGAAGGTGTTCCTTGAGT
GGCAAGAAGTAGCTGAGGAGTAGTTAGAGGACAACATGAGGTTGACAGAG
ATTCATCCAAATGCTGGGATCTATTCCAACATATTTGTAAACTCAAGGAA
GGATTAAAGATATAAGAAATAAAATGAGCAGCAACAGAATTCATGTAGCA
TTGGGTAGGAAGAAAACTCAAAACTCAACATGAGTGCAGTACCCTCCTCA
AGAGAAAGTAAAAGGGAGCCCACGCTGGATTTAGGAGGAAGTAAGGGCCT
TCCTACAAGACAGATAATATAGTCTTCTTCCAAATGGAGGCAGCCCATCA
CCCTCAAAGATTGAGAGATGAATCTGAGGATACCATTGAAAGTATAACAA
CGTAAAAACAGAATTCTAGGCCTTTAGGCCCAGGCTTGGAAATGTGGCCT
TTGTAAAGGTATGTTAATCATAAAAGAGATAGCGACATTCCTCTACCCAC
CCGCTTCCTGGGTTCAAAGAGTGCTCATTCAAAGAAAGTCACCCTGGCCA
TTACCAGAACCTGCAATGCAAATGTGCTATTGTTAGAGGCTCTTAGAAGC
TGTCTTGAGAGTTAACAATTACCAGGTATTCCTTGTGACTCTTGTAACTT
TACACTTCCTGTGACTCTTAACTGGTATCTTTGGTATCTTCCAACAATGC
CCTCCCCACTTCCTTGAGTTTCGGTTTCTTCCTTTAAATACCCCCCTTTA
CCCGCTACTGGGGGCGCCATGGTCCTCTACCCCCTTGCTGGGGTATGAAC
ATGGGCCCCAAAAACGCTTCTTTGAATAAAAATCCCTCTTTGCAATTTTT
GCATCCAAGAACCCCGTTTTCTTTGGGGTCTTGATTTTTTGGCGGTGTCC
CCCCTCCCCCTCGAAGTCCAAAATCTTTTGTGGGTAAATCCCTTTCCCAT
T

AGTTCTCNTNAAACTGATTGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCATTTATCCCTCTAAAGAACCA
AATCGGGTGGTTTCATCTGGCCCACATTAAGAAAGGTGATTTCTAAAAGG
AATAACTTCGAGAGCCTCAATAATTAGTAAATATTGATCATGTTTCAGAT
AATGGAAGTGAACTGTGTATCTTTGTGAGACACTCACTGTTTGTTAGCTG
TCATGAACATTTAGGATTTGAAGTGTGCATCCCTAGATATACCTTCTATG
TAGATATATGCTTCTATATAGCATTTCTTCCCAACAATTAAGTATGGCCC
CAGAAAACATTGTATATCTAAGAAGACAGTGCCTCTCACTACATTTAGAG
CAGGGAATTGCTGCTCACTGTCTTCTTTGCAGTTGATACAGCAGATTTCC
AGAAGGTAAAGAAAGGATTTCTAAAAGGTGAGTTAGAAAGATTTTCTGAG
TTTTCAGAAAGGGATGACATTTGGCTTCAGAAACATTAAAGCAAGTGAGC
GAACACAGAGAGAGCAAAGGGTGGAATGATTGACAGCTGTGGTGGCCAAG
GTGATGGCAGGACTAGTAAAGCCTAAAGCAAGAAGGCACTGTGGAGATCA
AGGAGAACTTCACTGACACTAGTTGCAATGTCCTTTCTATGTAAGCCCTA
GCCTATAACCTAGGAGCATCGAGGAAGCAGATGCTGAAATGCTATCAAGG
CAACCACATACCTAATTTCATTTGTTCCAGGCTTCAGATGCATTCCGCTT
AAGCTGCCTGCAGGGCCTTCACTTTCCCATCTTGCATGTGATAATGAGGG
AACACATTGCGAAGGGGTAGACCCAAATATCTCCTGCATGTAAAAGTTGT
GGTAAATCCTATTGTGCCTTCCTGCCTGCCTCTGACATTTTGACTTGAAT
TTCTTAAAAAAATTTTACGGTACCCCAGGTCTCCTGCGTTTATTTTCCCT
TACTTTTATTCCTTAAGGGCAATTTTTTTTCCCTTTTTGCAAAACCATTT
TTTTTCAAAGCACCGACCATTCTCTTTTCTTTAGACTTCCCACCCCTCCT
ACACAGTGCAAAATTTTTTTTCCAAACGCCCTCCCATAATGC

Query= MSMg01no122_h24.b1 MSMg01no122_h24.b1 CHROMAT_FILE:
MSMg01no122_h24.b1 PHD_FILE: MSMg01no122_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:01 2005
         (669 letters)



>mm_chr2_58670757_58671825
          Length = 1069

 Score =  791 bits (409), Expect = 0.0
 Identities = 409/409 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgaaacagtaatggggagactagagaggcatccagtgtctacaggcagctctttgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgaaacagtaatggggagactagagaggcatccagtgtctacaggcagctctttgaag 260

                                                                       
Query: 61  gtgttccttgagtggcaagaagtagctgaggagtagttagaggacaacatgaggttgaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttccttgagtggcaagaagtagctgaggagtagttagaggacaacatgaggttgaca 320

                                                                       
Query: 121 gagattcatccaaatgctgggatctattccaacatatttgtaaactcaaggaaggattaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagattcatccaaatgctgggatctattccaacatatttgtaaactcaaggaaggattaa 380

                                                                       
Query: 181 agatataagaaataaaatgagcagcaacagaattcatgtagcattgggtaggaagaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatataagaaataaaatgagcagcaacagaattcatgtagcattgggtaggaagaaaac 440

                                                                       
Query: 241 tcaaaactcaacatgagtgcagtaccctcctcaagagaaagtaaaagggagcccacgctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaactcaacatgagtgcagtaccctcctcaagagaaagtaaaagggagcccacgctg 500

                                                                       
Query: 301 gatttaggaggaagtaagggccttcctacaagacagataatatagtcttcttccaaatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatttaggaggaagtaagggccttcctacaagacagataatatagtcttcttccaaatgg 560

                                                            
Query: 361 aggcagcccatcaccctcaaagattgagagatgaatctgaggataccat 409
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggcagcccatcaccctcaaagattgagagatgaatctgaggataccat 609


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no122_h24.g1 MSMg01no122_h24.g1 CHROMAT_FILE:
MSMg01no122_h24.g1 PHD_FILE: MSMg01no122_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:01 2005
         (571 letters)



>mm_chr2_58784717_58785687
          Length = 971

 Score = 1096 bits (567), Expect = 0.0
 Identities = 570/571 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taagaaaggtgatttctaaaaggaataacttcgagagcctcaataattagtaaatattga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 taagaaaggtgatttctaaaaggaataacttcgagagcctcaataattagtaaatattga 712

                                                                       
Query: 61  tcatgtttcagataatggaagtgaactgtgtatctttgtgagacactcactgtttgttag 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 711 tcatgtttcagataatggaagtgaactgtgtatctttgtgggacactcactgtttgttag 652

                                                                       
Query: 121 ctgtcatgaacatttaggatttgaagtgtgcatccctagatataccttctatgtagatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ctgtcatgaacatttaggatttgaagtgtgcatccctagatataccttctatgtagatat 592

                                                                       
Query: 181 atgcttctatatagcatttcttcccaacaattaagtatggccccagaaaacattgtatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atgcttctatatagcatttcttcccaacaattaagtatggccccagaaaacattgtatat 532

                                                                       
Query: 241 ctaagaagacagtgcctctcactacatttagagcagggaattgctgctcactgtcttctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctaagaagacagtgcctctcactacatttagagcagggaattgctgctcactgtcttctt 472

                                                                       
Query: 301 tgcagttgatacagcagatttccagaaggtaaagaaaggatttctaaaaggtgagttaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgcagttgatacagcagatttccagaaggtaaagaaaggatttctaaaaggtgagttaga 412

                                                                       
Query: 361 aagattttctgagttttcagaaagggatgacatttggcttcagaaacattaaagcaagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aagattttctgagttttcagaaagggatgacatttggcttcagaaacattaaagcaagtg 352

                                                                       
Query: 421 agcgaacacagagagagcaaagggtggaatgattgacagctgtggtggccaaggtgatgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agcgaacacagagagagcaaagggtggaatgattgacagctgtggtggccaaggtgatgg 292

                                                                       
Query: 481 caggactagtaaagcctaaagcaagaaggcactgtggagatcaaggagaacttcactgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caggactagtaaagcctaaagcaagaaggcactgtggagatcaaggagaacttcactgac 232

                                          
Query: 541 actagttgcaatgtcctttctatgtaagccc 571
           |||||||||||||||||||||||||||||||
Sbjct: 231 actagttgcaatgtcctttctatgtaagccc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)