Query= MSMg01no123_f08.b1 MSMg01no123_f08.b1 CHROMAT_FILE:
MSMg01no123_f08.b1 PHD_FILE: MSMg01no123_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:55 2005
(335 letters)
>mm_chr2_47261638_47262372
Length = 735
Score = 621 bits (321), Expect = 0.0
Identities = 330/333 (99%)
Strand = Plus / Plus
Query: 1 cattttccagtgcatatgtcttatagctgtgagtaatggcagcatcaggaaattaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattttccagtgcatatgtcttatagctgtgagtaatggcagcatcaggaaattaagatc 260
Query: 61 ttctcatcttcacaggctcattcattaatttgcatatgtgtgcacatacaagcacataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcatcttcacaggctcattcattaatttgcatatgtgtgcacatacaagcacataaa 320
Query: 121 cagtttaaaaaaataatataattcatttgtaaaaattattctttgccaaaaatttaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtttaaaaaaataatataattcatttgtaaaaattattctttgccaaaaatttaacaa 380
Query: 181 tttaaatataaaaatattatttcaacaatattagatttctacttacacataccagatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaatataaaaatattatttcaacaatattagatttctacttacacataccagatatt 440
Query: 241 atataattgttcacttgtataactactggaaatgttattatataggacctgagatgctgc 300
|||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 441 atataattgttcacttgtataactactggaaatgttattagaaagggcctgagatgctgc 500
Query: 301 acttacacaacaacacaacaaaataaacatgga 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 acttacacaacaacacaacaaaataaacatgga 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_f08.g1 MSMg01no123_f08.g1 CHROMAT_FILE:
MSMg01no123_f08.g1 PHD_FILE: MSMg01no123_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:55 2005
(367 letters)
>mm_chr2_47344706_47345469
Length = 764
Score = 607 bits (314), Expect = e-178
Identities = 353/370 (95%), Gaps = 9/370 (2%)
Strand = Plus / Minus
Query: 1 attctcaaggctcaagtccatacactcttctatgaaatttaacacaaatcagccaaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attctcaaggctcaagtccatacactcttctatgaaatttaacacaaatcagccaaatcg 505
Query: 61 aataagaatagaaatgagcatctctatgaagacagaggagtctgggatgctcacatgcaa 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 aataagaatagaaatgagcatctctatgaagacagatgagtctgggatgctcacatgcaa 445
Query: 121 agtcatcaaataacataaataagcaatgctatattaaaaactttaaaagtgatgtggtgg 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 444 agtcatcaaataacataaataagcaatgctatattaaaaattttaaaagtgatgtg---- 389
Query: 181 caaa---agaatattgcttgaaacaacagaaacaagcatgtttattacaacaaatgtata 237
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 -aaagaaagaatattgcttaaaacaacagaaacaagcatgtttattacaacaaatgtata 330
Query: 238 aaactatatatttacacattaaaaaaaatttcacatgagttaaggccgtatcattaagga 297
||||||| ||||||||||||||||| | ||||||||||||||||||| || |||||||||
Sbjct: 329 aaactatgtatttacacattaaaaata-tttcacatgagttaaggccatagcattaagga 271
Query: 298 gttcataaaatgtatactaaatcatagatataattagatgttgtggaaagtgaaacttta 357
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 gttcataaaatgtatactaaatcatagatataatcagatgttgtggaaagtgaaacttta 211
Query: 358 cgaggcattg 367
||||||||||
Sbjct: 210 cgaggcattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 764
Length adjustment: 9
Effective length of query: 358
Effective length of database: 755
Effective search space: 270290
Effective search space used: 270290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
