Query= MSMg01no126_d03.b1 MSMg01no126_d03.b1 CHROMAT_FILE:
MSMg01no126_d03.b1 PHD_FILE: MSMg01no126_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:29 2005
(441 letters)
>mm_chr2_137188484_137189324
Length = 841
Score = 775 bits (401), Expect = 0.0
Identities = 428/437 (97%)
Strand = Plus / Minus
Query: 5 gaattccttggagagcccctgctctttgagttgttctcagtaggagccactaaggaggta 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 641 gaattccttggagagtttctgctctttgagttgttctcagtaggagccactaaggtggta 582
Query: 65 actagggtagaaagggaagcagagaagacctcaactgcctttattcatgtgtggagcagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 actagggtagaaagggaagcagagaagacctcaactgcctttattcatgtgtggagcagt 522
Query: 125 gcagaggacagatgaagcaaggtcttcagaaatttcctcacactgcactctgacacactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gcagaggacagatgaagcaaggtcttcagaaatttcctcacactgcactctgacacactt 462
Query: 185 tacggagcacacagagcaacagtaagagagtgggagacatgccaaaggtatcataaatat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aacggagcacacagagcaacagtaagagagtgggagacatgccaaaggtatcataaatat 402
Query: 245 tacagcagtggcttgtgtgtgtgccagatgatggagaaaagagtcagttttcttcatcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tacagcagtggcttgtgtgtgtgccagatgatggagaaaagagtcagttttcttcatcca 342
Query: 305 gtgaaagtgaaacaacggtgcatgtttcataccagaaagaaacatcccaaaccctctggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtgaaagtgaaacaacggtgcatgtttcataccagaaagaaacatcccaaaccctctggg 282
Query: 365 tgagtctgacaacgactagtgggcgataaaacaaaacagcagaacacactaggaaaagaa 424
||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgagtctgaaaaggactagtgggtgataaaacaaaacagcagaacacactaggaaaagaa 222
Query: 425 cagatactcagagctgc 441
||||||||| |||||||
Sbjct: 221 cagatactcggagctgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_d03.g1 MSMg01no126_d03.g1 CHROMAT_FILE:
MSMg01no126_d03.g1 PHD_FILE: MSMg01no126_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:29 2005
(395 letters)
>mm_chr2_137025268_137026059
Length = 792
Score = 696 bits (360), Expect = 0.0
Identities = 385/394 (97%), Gaps = 3/394 (0%)
Strand = Plus / Plus
Query: 2 aggaaactgtaatttcttcaacagtaatatttttgatgctttatgaaataacaaaaatca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aggaaactgtaatttcttcaacagtaatatttttgatgctttatgaaataacaaaaatca 261
Query: 62 catttaaagaatgaactcttggcctgtactttcctttatactaatttaggcaaataaatg 121
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 262 catttaaagaatgaactcttggcctgtactttcc-ttatactaatttaggcaagtaaatg 320
Query: 122 acctacacagtcttttctacaaaggctcctaggttaaattttggtgacattgttaggaaa 181
||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 321 acctacacagtcttttc--caaaggtttctaggttaaattttggtgacattgttaggaaa 378
Query: 182 cacccatgaaatcttgtgggtgcatggaaaccacgagtcagtctctaacttactgtgtag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cacccatgaaatcttgtgggtgcatggaaaccacgagtcagtctctaacttactgtgtag 438
Query: 242 atcacaccctattttgtgaacatgttctgttcccaaagtcccttggaaccatggatgcat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atcacaccctattttgtgaacatgttctgttcccaaagtcccttggaaccatggatgcat 498
Query: 302 tcttcttatagaacactgttccaatggctggttatcgtcccaccctatcacaaaggccta 361
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 499 tcttcttatagaacactgttccaatggctggttatcgtcccaggctatcacaaaggccta 558
Query: 362 ctggatttcccaagtggttgaattggaatgaatg 395
||||||||||||||||| ||||||||||||||||
Sbjct: 559 ctggatttcccaagtggctgaattggaatgaatg 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 792
Length adjustment: 9
Effective length of query: 386
Effective length of database: 783
Effective search space: 302238
Effective search space used: 302238
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
