Query= MSMg01no126_j07.b1 MSMg01no126_j07.b1 CHROMAT_FILE:
MSMg01no126_j07.b1 PHD_FILE: MSMg01no126_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:01 2005
(558 letters)
>mm_chr19_44780266_44781223
Length = 958
Score = 1006 bits (520), Expect = 0.0
Identities = 544/552 (98%)
Strand = Plus / Minus
Query: 7 gaattccataaattaacacacaaactagccaggcagtggtggcacacgcctttaatccca 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaattccataaattaatacacaaactagccaggcagtggtggcacacgcctttaatccca 651
Query: 67 gcacttaggaggcagaggcaggtggatttctgagttcaaggtcagcctggtctacagagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gcacttaggaggcagaggcaggtggatttctgagttcaaggtcagcctggtctacagagt 591
Query: 127 gagttccggaacagccagggctatacaaagaaatcctgtcttcgaaaaaacaaaacaaaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gagttccggaacagccagggctatacaaagaaatcctgtcttcgaaaaaacaaaacaaaa 531
Query: 187 cagacaaacaaaaacaaaacataaactaggcagggtgtagccaggtttggtggcatacac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cagacaaacaaaaacaaaacataaactaggcagggtgtagccaggtttggtggcatacac 471
Query: 247 ccatataccgaagactcagagttctaggccatacttatgtatggtggctgaggaagggct 306
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 470 ccatataccgaagactcagagttctaggccatacttacgtacggtggctgaggaagggct 411
Query: 307 ccaggtcccctcaaggaggagaggatctgtgttttagtgtcctgttgctgctgcaatatg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 410 ccaggtcccctcaaggaggagaggatctgtgttttagtgtcctgttgctgctgtaatatg 351
Query: 367 ccgccacaagcctaggggcttaaaacaacaaaatttaatgtcataccctcctgtggacta 426
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ccaccacaagcctaggggcttaaaacaacaaaatttaatgtcataccctcctgtggacta 291
Query: 427 gaggtctgaagttattctcactgtgttagagtcaaggtgtgggcagggcctgttcctcct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaggtctgaagttattctcactgtgttagagtcaaggtgtgggcagggcctgttcctcct 231
Query: 487 tctaagggtgtcagggagtttgtgaccttgccggtcccactactgaaggcggccctcatt 546
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 230 tctaagggtgtcagggagtttgtgaccttgccggtaccactactgaaggctgccctcatt 171
Query: 547 gcccaggtcaca 558
| ||||||||||
Sbjct: 170 gaccaggtcaca 159
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_j07.g1 MSMg01no126_j07.g1 CHROMAT_FILE:
MSMg01no126_j07.g1 PHD_FILE: MSMg01no126_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:01 2005
(154 letters)
>mm_chr2_35110832_35111386
Length = 555
Score = 267 bits (138), Expect = 2e-76
Identities = 150/154 (97%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 ttccctagagaa-ccgtgtttgtattataaatcctgctccattataaatgctctgttttt 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccctagagaagccgtgtttgtattataaatcctgctccattataaatgctctgttttt 260
Query: 60 caaatggtgtctggggccatgtcgggggtggggggtagggggagtcccatttcactctgg 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 caaatggtgtctggggccatggcgggggtggggggtagggggagtcccatttcacactgg 320
Query: 120 cttgaaaatgctctcacccttgcttctctgacca 153
|||||||||||||||||||| |||||||||||||
Sbjct: 321 cttgaaaatgctctcaccctcgcttctctgacca 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 555
Length adjustment: 8
Effective length of query: 146
Effective length of database: 547
Effective search space: 79862
Effective search space used: 79862
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
