Query= MSMg01no126_m03.b1 MSMg01no126_m03.b1 CHROMAT_FILE:
MSMg01no126_m03.b1 PHD_FILE: MSMg01no126_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:16 2005
(475 letters)
>mm_chr2_127478104_127478979
Length = 876
Score = 891 bits (461), Expect = 0.0
Identities = 470/473 (99%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 4 gaattcctctcccc-gatctctataattctgcctttagaagagaggaggagagtagaatg 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctctccccagatctctataattctgcctttagaagagaggaggagagtagaatg 263
Query: 63 ctggggccaaatttggcagcatgcccctctggaaagttcagagaggaccctgcaacacag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctggggccaaatttggcagcatgcccctctggaaagttcagagaggaccctgcaacacag 323
Query: 123 ggcacacaacaccacatagcctggaagagtcttagcacctctttctgtcctactccctag 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggcacacaacaccacatagcctggaagagtcttagcacctctttctgtcctactccctaa 383
Query: 183 ggaaatttcccctcaaacagagagtgtccatgccatggcgctgtgagaacttcaggacac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaaatttcccctcaaacagagagtgtccatgccatggcgctgtgagaacttcaggacac 443
Query: 243 ctgggaacctcactcctgcctctaagatatccattcttctatccactctccaaaaaggtc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgggaacctcactcctgcctctaagatatccattcttctatccactctccaaaaaggtc 503
Query: 303 ttaaaaggtggcctggattacatatggtcacacccactgagtcagtggtcagtctggggc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttaaaaggtggcctggattacatatggtcacacccactgagtcagtggtcagtctggggc 563
Query: 363 ttatcgttattggatgcagtgactaagaacccatggagaatatttttatgtactggtggt 422
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 564 ttatcgttattggatgcagtgactaagaacccatggagaatatttttatgtagtggtggt 623
Query: 423 gttgcaaccagcagctccgaagtgactctgagatgtccctgcattccccagtg 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttgcaaccagcagctccgaagtgactctgagatgtccctgcattccccagtg 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space: 402690
Effective search space used: 402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_m03.g1 MSMg01no126_m03.g1 CHROMAT_FILE:
MSMg01no126_m03.g1 PHD_FILE: MSMg01no126_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:16 2005
(528 letters)
>mm_chr2_127636429_127637356
Length = 928
Score = 998 bits (516), Expect = 0.0
Identities = 525/528 (99%)
Strand = Plus / Minus
Query: 1 agtaaggaaaccttagagatatctgaccaagtggttgagttaatgtcaccagtaataggt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 810 agtaaggaaaccttagagatatctgaccaagtggttgggttaatgtcaccagtaataggt 751
Query: 61 tgagtttatagcacatatcctcaaagttactcccttatagtcttctctgaaatctataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgagtttatagcacatatcctcaaagttactcccttatagtcttctctgaaatctataga 691
Query: 121 tcctgacctctattcaaaattgtcagtggaataaagggtaggaaggatccacaggtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcctgacctctattcaaaattgtcagtggaataaagggtaggaaggatccacaggtggct 631
Query: 181 gtagtcagaagcaattgaatagacagggcagccatgtgcaatatgctgacctatgctgaa 240
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 630 gtagtcagaagcaattgaatagacagggcagccatgtgcaatgtgctgacttatgctgaa 571
Query: 241 gtttggaaaggaaatagaaaaaccaaataaggactccaggtactagtatcatttttaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtttggaaaggaaatagaaaaaccaaataaggactccaggtactagtatcatttttaaca 511
Query: 301 ataaaccacattttggttaagattactgttaaagggaactaacaaagaagaactctttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ataaaccacattttggttaagattactgttaaagggaactaacaaagaagaactctttac 451
Query: 361 tatctttgtaattcttttcaagtttaaagaataatatacaagagaaaaacatgtctgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tatctttgtaattcttttcaagtttaaagaataatatacaagagaaaaacatgtctgatt 391
Query: 421 gttatgcatttgcattgacgtattctaaaaacagtttatatctattttcctttaactttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gttatgcatttgcattgacgtattctaaaaacagtttatatctattttcctttaactttt 331
Query: 481 ttttttcaatcttaaaatgtttgaggttttgttttggtttttgagaaa 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttttttcaatcttaaaatgtttgaggttttgttttggtttttgagaaa 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
