Query= MSMg01no126_p05.b1 MSMg01no126_p05.b1 CHROMAT_FILE:
MSMg01no126_p05.b1 PHD_FILE: MSMg01no126_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:32 2005
(401 letters)
>mm_chr2_51207995_51208795
Length = 801
Score = 752 bits (389), Expect = 0.0
Identities = 398/401 (99%)
Strand = Plus / Minus
Query: 1 aagtgtttatatagcttgttaaacatcacaaacttgaatctgatatgcagtttgtgttta 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 463 aagtgtttatatagcttgttaaacatcagaaacttgaatctgatatgcagtttgtgttta 404
Query: 61 ctaggtatttcatgtatcaatggatgcaattttatagagatttagtcattatgacatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctaggtatttcatgtatcaatggatgcaattttatagagatttagtcattatgacatcat 344
Query: 121 taacattctattgatagacaggctcacaggcacacaataatgcagagctttgtctgactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 taacattctattgatagacaggctcacaggcacacaataatgcagagctttgtctgactc 284
Query: 181 ctgcagccttgttcttataaaaaaaaatatcctgtgtagcagaatcatgtgtgagcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgcagccttgttcttataaaaaaaaatatcctgtgtagcagaatcatgtgtgagcatcc 224
Query: 241 tgtatttttctcccacagtcccctgtgctgcttagttttttttgtcagcttgacacaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tgtatttttctcccacagtcccctgtgctgcttagttttttttgtcagcttgacacaaac 164
Query: 301 tgatgacatctgggcagagggactgtcaggtgaggacctgcctccaccacactaatctat 360
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 163 tgatgacatctgggcagagggactgtcaggtgaggacctgcctccatcagactaatctat 104
Query: 361 aggcaagcctgtggcggcatcgtcttgattcgaaattggtg 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 aggcaagcctgtggcggcatcgtcttgattcgaaattggtg 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_p05.g1 MSMg01no126_p05.g1 CHROMAT_FILE:
MSMg01no126_p05.g1 PHD_FILE: MSMg01no126_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:32 2005
(412 letters)
>mm_chr2_51052436_51053248
Length = 813
Score = 791 bits (409), Expect = 0.0
Identities = 412/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 aagttcctaaggccaaacttcttcagctagactttcaaattctgctaaatcaaggttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagttcctaaggccaaacttcttcagctagactttcaaattctgctaaatcaaggttagt 260
Query: 61 tattacttacgtattacagacccttggcactttcccccaggaagata-aattatttccta 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tattacttacgtattacagacccttggcactttcccccaggaagatacaattatttccta 320
Query: 120 gaaacacagaacaccattcaactttcaccggaaattctccaaaagagatcattacagaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaacacagaacaccattcaactttcaccggaaattctccaaaagagatcattacagaaa 380
Query: 180 gaagcatatatgctagagactcctgactctgtcagggccagcagatcattggagttaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcatatatgctagagactcctgactctgtcagggccagcagatcattggagttaaat 440
Query: 240 agaaacagctagcatacatgaataaccatgacctccatgaaggatggccctgcatcctgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaacagctagcatacatgaataaccatgacctccatgaaggatggccctgcatcctgg 500
Query: 300 aatgcattgcttttatagacagcccagagtctctatgtttttcctctctgggaggcacaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgcattgcttttatagacagcccagagtctctatgtttttcctctctgggaggcacaa 560
Query: 360 tatagctagaattacttgctacttcagcactaaaaaagtcaattttcttagat 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatagctagaattacttgctacttcagcactaaaaaagtcaattttcttagat 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
