ATATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGACACCGC
GGAATTCACTTTGTATATCCCGCTGGCCTCGAACTCAGAAATCCACCTGC
CTCTGCCTCCCAAGCGCTGCGATTACAGCCGTGTGCCACCACTGTTTGGC
TCCTAACCTCTATCTTATTACATCTATCATTTTAATATCTACTCTAATAC
ACAAAGCATAAAATTCTGACAGCTGGTGAACCGGCTTACTGCATGCTATG
CGCTGCCAATTACGAGTACCTGACTTTTGTTAGTGCACCGGCAACTGACC
TTCTGGTTGCCTACTTTCCAACCTATGCTATTTGGATTATTGTCATTCAC
ACATCCGCATTTAAGGAAGTCCCCTATCTCTAATTCCTGACTGGTGCTAT
ATTAGACCTGCAATTAGTCACCCCCCCCCACAAGAATTTAGGCTCATAAT
CTATGTGCCACTTTCCCTTTTGTCACGTTGTCCCCCCTTCCTTTTTATCT
ATTCCTTTTTTCACCCCAAAACCCCCCTCTCTTCTCATTTCCCATCTCCT
TTCCTCTCTCCCCTACTTCTTTTTCCTTTTCCCCTTTTCCCCCTTTCCAC
CCCCCCCCCTCAACCCTTTTCCCCTCTTTTTATTAACCCCCCTCCTTTAT
TTTTCCCCCTCCCCTCCCCCTCTCACCTTTTTTTCCCTTTCCCTCCATTT
CTCCCCACCTTCTACTTTAC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAGTGGCGCCCAAAGGGATTAAA
AAATTAATCTCCCCCGCAAAGGAACCCGAAATTCTAACGAGAAAACATGG
AGATGAAAGGAGCCCTCTCTCCAAGAAGACAAGTTCCTACAAAGCCTTTT
GGGGCCGGGGAGAATTTTGCACAGGGCAGCAGTCTAGGATGCGACAGTCA
GGCGCTCTAACTGCGAGAAGAGAGAGGAACTTTGTGCTCTGCCTGAGCCA
GCTGAAGCTTGGGGGCCTAGGATTCTCCTGTCTTTTAAAAAACCACATGA
CTTAATGGGAAAAGACTTATTACGGGTCTCCTAGGAAAAGGCAAAAATAA
AATATTTTTTTAATCGACATTCCTTCTCACTGAAACAAGTGTAGATAGAC
AGGGTAAATTCACCTTCAAGTAGCACCTGTCTTGGATTTATAAAGGGAAT
TGGTGTCAACACATATAGCTCTCTTCTACCTCTCGGAGCAGAGGGGCTCT
CTGAGCGCCGTGCCCTCAAAGAGCATGCTCAAAAACACATGGTAGGAGAG
GCGCAGGATTTGGAGCCCAAGAATTCAAAGCAGTAGGAAGGAGAAAGGAA
CGCCTGTTTACTGACTAATATTGCTAGTCACCAGAAAGAACACAACACAG
GATAAGGAGT

Query= MSMg01no127_f06.g1 MSMg01no127_f06.g1 CHROMAT_FILE:
MSMg01no127_f06.g1 PHD_FILE: MSMg01no127_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:02 2005
         (585 letters)



>mm_chr2_71133766_71134750
          Length = 985

 Score = 1116 bits (577), Expect = 0.0
 Identities = 583/585 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagtggcgcccaaagggattaaaaaattaatctcccccgcaaaggaacccgaaattcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagtggcgcccaaagggattaaaaaattaatctcccccgcaaaggaacccgaaattcta 260

                                                                       
Query: 61  acgagaaaacatggagatgaaaggagccctctctccaagaagacaagttcctacaaagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgagaaaacatggagatgaaaggagccctctctccaagaagacaagttcctacaaagcc 320

                                                                       
Query: 121 ttttggggccggggagaattttgcacagggcagcagtctaggatgcgacagtcaggcgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttggggccggggagaattttgcacagggcagcagtctaggatgcgacagtcaggcgct 380

                                                                       
Query: 181 ctaactgcgagaagagagaggaactttgtgctctgcctgagccagctgaagcttgggggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaactgcgagaagagagaggaactttgtgctctgcctgagccagctgaagcttgggggc 440

                                                                       
Query: 241 ctaggattctcctgtcttttaaaaaaccacatgacttaatgggaaaagacttattacggg 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ctaggattctcctgtcttttaaaaaaccacatgacttaacgggaaaagacttattacggg 500

                                                                       
Query: 301 tctcctaggaaaaggcaaaaataaaatatttttttaatcgacattccttctcactgaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tctcctaggaaaaggcaaaaataaaatatttttttaatcgacatttcttctcactgaaac 560

                                                                       
Query: 361 aagtgtagatagacagggtaaattcaccttcaagtagcacctgtcttggatttataaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtgtagatagacagggtaaattcaccttcaagtagcacctgtcttggatttataaagg 620

                                                                       
Query: 421 gaattggtgtcaacacatatagctctcttctacctctcggagcagaggggctctctgagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattggtgtcaacacatatagctctcttctacctctcggagcagaggggctctctgagc 680

                                                                       
Query: 481 gccgtgccctcaaagagcatgctcaaaaacacatggtaggagaggcgcaggatttggagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccgtgccctcaaagagcatgctcaaaaacacatggtaggagaggcgcaggatttggagc 740

                                                        
Query: 541 ccaagaattcaaagcagtaggaaggagaaaggaacgcctgtttac 585
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaagaattcaaagcagtaggaaggagaaaggaacgcctgtttac 785


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)