Query= MSMg01no127_i13.b1 MSMg01no127_i13.b1 CHROMAT_FILE:
MSMg01no127_i13.b1 PHD_FILE: MSMg01no127_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(363 letters)
>mm_chr2_83641988_83642750
Length = 763
Score = 642 bits (332), Expect = 0.0
Identities = 353/360 (98%), Gaps = 2/360 (0%)
Strand = Plus / Plus
Query: 5 gaattcccttac-acaacctgccaatcgaggatctcttcaactctacactagtaagtcac 63
|||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccttacaagaacctgccgatcgaggatctcttcaactctacactagtaagtcac 264
Query: 64 cggcttcagagcacggatacctgccgtgcaaacaccttagtgattttagtggaagtttaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cggcttcagagcacggatacctgccgtgcaaacaccttagtgattttagtggaagtttaa 324
Query: 124 ctagaacaagtgaaaagataagttattggagaggattatagaatggaaagcattctcttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctagaacaagtgaaaagataagttattggagaggattatagaatggaaagcattctcttt 384
Query: 184 ctttttttaaattacatttgttgttgctcgaggagggtcacgtatcacagtgtgcaggtc 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 ctttttttaaattacatttgttgttgct-gaggagggtcacgtatcacagtgtgcaggtc 443
Query: 244 agaggacagcttttcataactgattctggtacgtgaggattggaccttggatatgaggtg 303
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 agaggacagcttttcagaactgattctgggacgtgaggattggaccttggatatgaggtg 503
Query: 304 tggtgaccagggcctttagctgacgagtcatcccaccgatccaggctctggtcccttggt 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 tggtgaccagggcctttagctgacgagtcatcccaccgacccaggctctggtcccttggt 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_i13.g1 MSMg01no127_i13.g1 CHROMAT_FILE:
MSMg01no127_i13.g1 PHD_FILE: MSMg01no127_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(604 letters)
>mm_chr2_83785641_83786644
Length = 1004
Score = 1122 bits (580), Expect = 0.0
Identities = 598/604 (99%)
Strand = Plus / Minus
Query: 1 tttcagcgggcaccaggaaggggggcaacatttggaatgtaaataaataagacatttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tttcagcgggcaccaggaaggggggcaacatttggaatgtaaataaataagacatttttt 802
Query: 61 ttaatgtcgtacaagtttaagataaggcaaagcctcccctggattgccctcattcacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttaatgtcgtacaagtttaagataaggcaaagcctcccctggattgccctcattcacctc 742
Query: 121 cttctctcttatcaccaacttcaggttcctcctccaagtgccacgtgtttactgctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttctctcttatcaccaacttcaggttcctcctccaagtgccacgtgtttactgctctgg 682
Query: 181 agaagtcctgggagaatggagctgatgagtgaggcagactaaggtctcatgcaatagccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaagtcctgggagaatggagctgatgagtgaggcagactaaggtctcatgcaatagccg 622
Query: 241 actttgtccctcatgtcagacaaattaaactctctgagggttaaatggggtcacatgagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actttgtccctcatgtcagacaaattaaactctctgagggttaaatggggtcacatgagt 562
Query: 301 caagcatgcaatcacagtgactagccctacacgtaacacacccacacctggggcagacaa 360
|||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 561 caagcatgcaatcacagtgactagccctacacgtaagagagtcacacctggggcagacaa 502
Query: 361 gctgcatgtagtgggcaagccacctgtggcaaaaacatgttttcacaccgagtcatgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgcatgtagtgggcaagccacctgtggcaaaaacatgttttcacaccgagtcatgtaa 442
Query: 421 tagataacctgaggtaaactcattcctagccactgtacctgggaggagcaagaaaacaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagataacctgaggtaaactcattcctagccactgtacctgggaggagcaagaaaacaca 382
Query: 481 tgccaagaacacattctgtgttttgaagaaagtggcatcacaagattcttggcttggcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tgccaagaacacattctgtgttttgaagaaagtggcatcacaagattcttggcttggtgt 322
Query: 541 cttgggagttttctcacaagtactcagaaatagtctcacattactacattcttgggccaa 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgggagttttctcacaagcactcagaaatagtctcacattactacattcttgggccaa 262
Query: 601 cagt 604
||||
Sbjct: 261 cagt 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
