Query= MSMg01no127_m21.b1 MSMg01no127_m21.b1 CHROMAT_FILE:
MSMg01no127_m21.b1 PHD_FILE: MSMg01no127_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:41 2005
(448 letters)
>mm_chr2_129377140_129377987
Length = 848
Score = 812 bits (420), Expect = 0.0
Identities = 441/448 (98%)
Strand = Plus / Plus
Query: 1 agcatacaagtcaagcatcccaacaaaagaacaaatatccttactgagtggagggcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatacaagtcaagcatcccaacaaaagaacaaatatccttactgagtggagggcccca 260
Query: 61 aacccaaaacacatgctgcaggagcctgcctcagctactggcaccgagggtgttctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacccaaaacacatgctgcaggagcctgcctcagctactggcaccgagggtgttctgtga 320
Query: 121 cttattgatttaagaggcctatggtggtgacaccccaaaagcacatttcaaaatctagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttattgatttaagaggcctatggtggtgacaccccaaaagcacatttcaaaatctagga 380
Query: 181 acaactgccccaaagtctttccagagccttcatcttgcctccttctcccatcctgtagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaactgccccaaagtctttccagagccttcatcttgcctccttctcccatcctgtagcc 440
Query: 241 aaaattcaataagaaaaagccaagtgcacaaacatcaccgccacatatacttcagcaaaa 300
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 aaaattcaacaagaaaaagccaagtgcacaaacatcaccgccacaaatacttcagcaaaa 500
Query: 301 ccccgtgccatctggacttcctatgctaaggaatgtaacgcacccctcaaaaatgttgtt 360
|||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 501 ccccgtgccatctggacttcctatgctaaggaatgtaacgtagtcttcaaaaatgttgtt 560
Query: 361 gacaagttagtaatagcatagagaaaacacacacacacacatacacacacacatacacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 gacaagttagtaatagcatagagaaaacacacacacacacatacacacacacacacacac 620
Query: 421 acacacacacacgtgtatgtgttgggag 448
||||||||||||||||||||||||||||
Sbjct: 621 acacacacacacgtgtatgtgttgggag 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_m21.g1 MSMg01no127_m21.g1 CHROMAT_FILE:
MSMg01no127_m21.g1 PHD_FILE: MSMg01no127_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:41 2005
(522 letters)
>mm_chr2_129498924_129499845
Length = 922
Score = 661 bits (342), Expect = 0.0
Identities = 369/378 (97%), Gaps = 2/378 (0%)
Strand = Plus / Minus
Query: 146 tccagggttagagagcaactgttgcttttgtgaaggacccggttcagttccttgtactca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tccagggttagagagcaactgttgcttttgtgaaggacccggttcagttccttgtactca 863
Query: 206 agtagtaattcacaaccattttaactccagttccaggggatccaatgcccttctctgacc 265
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 862 agtagtaattcacaaccattttaactccagttcaaggggatccaatgcccttctctgacc 803
Query: 266 tccctgggtcaggcatgggtgtggtgcactcaaatacatccaggcaaactaggcatacat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tccctgggtcaggcatgggtgtggtgcactcaaatacatccaggcaaactaggcatacat 743
Query: 326 ataaaataagactagaacccaaaacagcctatgatatttggttatgtactctgcccagag 385
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ataaaataagactagaaattaaaacagcctatgatatttggttatgtactctgcccagag 683
Query: 386 ctctagggaaagtttagagtaataaccgcgatgaaagcaaaggtgataaaccataaatgc 445
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 682 ctctagggaaagtttagagtaataaccgcgatgaaagcaagggtgataaaccataaatgc 623
Query: 446 tgaggtgtttgactaaagtggccccgagtgatattaaaagatgacaaggcagtttttatt 505
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 622 tgaggtgtttgactaacgtggccctgagtgatattaaaagatgacaaggcagtttttatt 563
Query: 506 c-agggacactcatggct 522
| | ||||||||||||||
Sbjct: 562 cga-ggacactcatggct 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
