Query= MSMg01no128_g22.b1 MSMg01no128_g22.b1 CHROMAT_FILE:
MSMg01no128_g22.b1 PHD_FILE: MSMg01no128_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:31 2005
(194 letters)
>mm_chr2_173526060_173526653
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 192/194 (98%)
Strand = Plus / Minus
Query: 1 tttcatcaaggtcagttcatccaggtaagaccaggaagatgagcaaagtgacagggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttcatcaaggtcagttcatccaggtaagaccaggaagatgagcaaagtgacagggcaga 335
Query: 61 gtatccctcttcacctgacccacagtcacctaatgctgagtccacggggcagcggccaca 120
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 334 gtatccctcttcacctgacccacagtcacctaatgctgagcccatggggcagcggccaca 275
Query: 121 gcaccagaagccacaagtctttcagatgttaccagttcttaaactagcatcctatatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaccagaagccacaagtctttcagatgttaccagttcttaaactagcatcctatatttc 215
Query: 181 tactctaggataca 194
||||||||||||||
Sbjct: 214 tactctaggataca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_g22.g1 MSMg01no128_g22.g1 CHROMAT_FILE:
MSMg01no128_g22.g1 PHD_FILE: MSMg01no128_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:31 2005
(274 letters)
>mm_chr2_173353837_173354511
Length = 675
Score = 509 bits (263), Expect = e-149
Identities = 272/275 (98%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 1 ctaattgtggcttcgaaaag-aatactaacttaactctaggcatactcgcctatggctgg 59
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ctaattgtggcttcgaaaagcaatactaacttaactctaggcatacttgcctatggctgg 260
Query: 60 ggttgcagttcagttggttagatggcttgtaaaacagccacaaagctcacctcagaaact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttgcagttcagttggttagatggcttgtaaaacagccacaaagctcacctcagaaact 320
Query: 120 ggaattactagagatctgcagtcacagcatatgggacatggagacagaagaaatgaaact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaattactagagatctgcagtcacagcatatgggacatggagacagaagaaatgaaact 380
Query: 180 caagaagaaggaagacaactatgtggctacttccgtctttcttagaagggggaacaaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaagaaggaagacaactatgtggctacttccgtctttcttagaagggggaacaaaat 440
Query: 240 acccatatgaggagttacagagacaaggtttggag 274
||||||| |||||||||||||||||||||||||||
Sbjct: 441 acccataggaggagttacagagacaaggtttggag 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 675
Length adjustment: 9
Effective length of query: 265
Effective length of database: 666
Effective search space: 176490
Effective search space used: 176490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
