CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGTTCATTTCTGAGCCCCATTTTTAATGGGGTTATTTGCTTTTCT
GAAGTCCACCTTCTTGAGTTCTCCATATATGTTGGATATTAGTCCCCTAT
CTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTT
CTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAG
GTCCCATTTGTCAATTCTGGATCTTACAGCACAAGCCATTGCTGTTCTGT
TCAGCAATTTTTCCCCTGTTCCCATATCTTCAAGGCTTTTCCCCACTTTC
TACTCTATAAGTTTCAGTGTCTCTGGTTTTAAGTGAAGTTTCTTGATCCA
CTTAGATTTGACCTTAGTACAAGGAGATGAGTATGGATCGATTCGCATTC
TTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTG
TCTTTCTTCCACTGGATGGTTTTAGCTCTCTTGTCGAAGATCAAGTGACC
ATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTA
CTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGTTCTG
TAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCCGAGGTTCTTTTATC
CTTGAGAAGAGTTTTTGCT

CCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATCCTGATGTTCAGGAAGCATTGG
TTGTTCTCTGTTATTTTTCTTGGGCCCGAAATCTAACTATTCTAATCACC
TTGAAGCCACCTTGGATCCCACTCAGTTATGGTCTTATATTGTAAGAAGC
TCACCACACCACTTATCAAATATGAGTTCATGCATTCTCTATTTACTTCA
TTTATTTATGCAATTGCTGTAGGTACTGTAATGGTGTCAGGAACATATTC
TCTTATACTTAATAGTAAACTCTATTTAAAAGATGTTTACTTCAAAAACT
AAACCAAAATTTTAATAATGTCATAATGAAAGTTAAAACAATAAAACTTA
TAGTAAATGATAGATCTTTATTGTAATGGACTTTACAATAATTTTTTAGA
CATGACACCAAAATCATGTTTGAAAAGGGGAAAATTAGATCATCAAAATG
TAAACTTTGTTAGTATATGAATCATGAATTACAATGAGGAGGCTTCTCAA
AAAACTCAAAATATAATTATCTGTATTCCAATAATCAATCAAAGGGTATA
TGGTGGTTTGCTTGAAAATGCACTCCATAGGTCAATAGGAAATGGCATTA
TTAGGAGGTATGGGCTTGTTGGAATAGGTGTAGCCTTATTCTAAAAGTAC
TTCACTTACAGTGGGCTTTGA

Query= MSMg01no129_l20.g1 MSMg01no129_l20.g1 CHROMAT_FILE:
MSMg01no129_l20.g1 PHD_FILE: MSMg01no129_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:16 2005
         (629 letters)



>mm_chr2_39587906_39588934
          Length = 1029

 Score = 1131 bits (585), Expect = 0.0
 Identities = 612/621 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcctgatgttcaggaagcattggttgttctctgttatttttcttgggcccgaaatcta 60
           |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 621 aatcctgatgttcaggaagcattggttgttctctgttatttttcttgggtaggaaatcta 562

                                                                       
Query: 61  actattctaatcaccttgaagccaccttggatcccactcagttatggtcttatattgtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actattctaatcaccttgaagccaccttggatcccactcagttatggtcttatattgtaa 502

                                                                       
Query: 121 gaagctcaccacaccacttatcaaatatgagttcatgcattctctatttacttcatttat 180
           |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gaagctcaccacacgacttatcaaatatgagttcatgcattctctatttgcttcatttat 442

                                                                       
Query: 181 ttatgcaattgctgtaggtactgtaatggtgtcaggaacatattctcttatacttaatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatgcaattgctgtaggtactgtaatggtgtcaggaacatattctcttatacttaatag 382

                                                                       
Query: 241 taaactctatttaaaagatgtttacttcaaaaactaaaccaaaattttaataatgtcata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 taaactctatttaaaagatgtttacttcaaaaactaaaccaaaattttaataacgtcata 322

                                                                       
Query: 301 atgaaagttaaaacaataaaacttatagtaaatgatagatctttattgtaatggacttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaagttaaaacaataaaacttatagtaaatgatagatctttattgtaatggacttta 262

                                                                       
Query: 361 caataattttttagacatgacaccaaaatcatgtttgaaaaggggaaaattagatcatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caataattttttagacatgacaccaaaatcatgtttgaaaaggggaaaattagatcatca 202

                                                                       
Query: 421 aaatgtaaactttgttagtatatgaatcatgaattacaatgaggaggcttctcaaaaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 aaatgtaaactttgttagtatatgaatcatgaattacaatgaggaggcttctcaaaaaat 142

                                                                       
Query: 481 tcaaaatataattatctgtattccaataatcaatcaaagggtatatggtggtttgcttga 540
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcaaaatataattatttgtattccaataatcaatcaaagggtatatggtggtttgcttga 82

                                                                       
Query: 541 aaatgcactccataggtcaataggaaatggcattattaggaggtatgggcttgttggaat 600
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  aaatgcattccataggtcaataggaaatggcattattaggaggtatgggcttgttggaat 22

                                
Query: 601 aggtgtagccttattctaaaa 621
           |||||||||||||||||||||
Sbjct: 21  aggtgtagccttattctaaaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)