Query= MSMg01no131_b23.b1 MSMg01no131_b23.b1 CHROMAT_FILE:
MSMg01no131_b23.b1 PHD_FILE: MSMg01no131_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:14 2005
(550 letters)
>mm_chr2_157767218_157768166
Length = 949
Score = 1017 bits (526), Expect = 0.0
Identities = 544/550 (98%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 1 ttctgtctgcgttccacaccagtgcttcttgctctagccataagctcatgcgttcctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgtctgcgttccacaccagtgcttcttgctctagccataagctcatgcgttcctgct 260
Query: 61 tctcaccaggaggctcttatggggcctgtgcggccaactctggaatcctctgtgggtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcaccaggaggctcttatggggcctgtgcggccaactctggaatcctctgtgggtctg 320
Query: 121 tcacattgtttccaggctggaagtcggttcctagcctggctacatactgatgctggctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacattgtttccaggctggaagtcggttcctagcctggctacatactgatgctggctcc 380
Query: 181 tgaccaggccaagacttcttttttggagtcccaagtttccccctcagtaaatccacttac 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 381 tgaccaggccaagacttcttttttggagtcacaagtttccccctcagtaaatccacc-ac 439
Query: 241 cttatctgtatgcattgtaagacaaaagggtagcattagggagccactccaattggaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttatctgtatgcattgtaagacaaaagggtagcattagggagccactccaattggaaaa 499
Query: 301 aggagatggggtgagtccttccactcaagagacactagctgctgtttgtgagttctctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggagatggggtgagtccttccactcaagagacactagctgctgtttgtgagttctctat 559
Query: 361 tgacccttgtgtgtgtccctggctgtgtgtctcagtgcaggctgggaaatatgtctacag 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgacccttgtgtgtgtccccggctgtgtgtctcagtgcaggctgggaaatatgtctacag 619
Query: 421 gccatacctgccttctcaggaaccatcatttttaccctgggttcccttacttgggaggtg 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 620 gccatacctgccttctcaggaaccatcatttttaccctgggttctcttacttgggaggtg 679
Query: 481 ggaacagcagggaaccactagagtgatctgtgggacttggaaggcacagataatgccatc 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 ggaacagcagggaaccactagagtgatctgtgggacttggcaggcacagataatgccatc 739
Query: 541 tagagaggga 550
||||||||||
Sbjct: 740 tagagaggga 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 949
Length adjustment: 10
Effective length of query: 540
Effective length of database: 939
Effective search space: 507060
Effective search space used: 507060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_b23.g1 MSMg01no131_b23.g1 CHROMAT_FILE:
MSMg01no131_b23.g1 PHD_FILE: MSMg01no131_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:14 2005
(573 letters)
>mm_chr2_157901270_157902242
Length = 973
Score = 1046 bits (541), Expect = 0.0
Identities = 562/569 (98%)
Strand = Plus / Minus
Query: 5 ttatggcttttggacttcagctctgggcgacaattcctatcaccctagtaggacaaaatg 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 773 ttatggcttttggacttcagctctgggcgacaattcctatcacactagtaggacaaaatg 714
Query: 65 gtttctgccctttccaatgtcaaatataagcctgccagattacagtcatttccagggcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gtttctgccctttccaatgtcaaatataagcctgccagattacagtcatttccagggcca 654
Query: 125 ggcccactctttactagacgtaaaaatcgcaactacatcattcagtcataatgtcagctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggcccactctttactagacgtaaaaatcgcaactacatcattcagtcataatgtcagctg 594
Query: 185 gcatgataatggaattcaaccccaaattagtctccctccactcccttcctctgctggagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gcatgataatggaattcaaccccaaattagtctccctccactcccttcctctgctggagg 534
Query: 245 tgagttgtttgagtactcctctctctgcatgggagcaaggatgtttatagtggcaggaac 304
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 533 tgagttgtttgagtactcctctctctgcatgggagcaaggatgcatatagtggcaggaac 474
Query: 305 tgcctggcacgctcagtgtcctatctgtagagatgttcaagtccagtcaccatgctgtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgcctggcacgctcagtgtcctatctgtagagatgttcaagtccagtcaccatgctgtgg 414
Query: 365 atgcgtccacatggtggcgttattgtaagcttcggggtgagagcaacatgcacgagagcc 424
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 413 atgcgtccacatggtggcgttattgtaagcttcagggtgagagcaacatgcacgagagcc 354
Query: 425 cagactccagctgtggagcagttatcagcctgggcatgctatcccaacagctcccttctc 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 353 cagactccagctgtggagcagttatcagcctgggcatgctatcccaacagctcccttccc 294
Query: 485 agccccaggggacagagggtcctgctttaagaaggtgctctgaaactggggaacctggag 544
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 293 agccccaggggacagagggtcctgctttaggaaggtgctctgaaactggggaccctggag 234
Query: 545 caatgtggcagggaaggctgtggtgagaa 573
|||||||||||||||||||||||||||||
Sbjct: 233 caatgtggcagggaaggctgtggtgagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
