Query= MSMg01no131_i15.b1 MSMg01no131_i15.b1 CHROMAT_FILE:
MSMg01no131_i15.b1 PHD_FILE: MSMg01no131_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:48 2005
(625 letters)
>mm_chr2_3975424_3976447
Length = 1024
Score = 1081 bits (559), Expect = 0.0
Identities = 609/627 (97%), Gaps = 7/627 (1%)
Strand = Plus / Minus
Query: 2 aaattaacaccaggactctctttccttatgtggctgctctcagatcggcttgttatccat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aaattaacaccaggactctctttccttatgtggctgctctcagatcggcttgttatccat 765
Query: 62 gtaggcatgccctcttgctcagaatcttcagcctggaaacactgtttaaaacacccaaaa 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 764 gtaggcatgccctcttgctcagaatcttcagcctggaaacactgtttaaaacacccgaaa 705
Query: 122 atgcgatttcttgaggtttaaaatgacatcaaagtgtgtctctccagaaggtgctgtaaa 181
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 704 atgtgatttcttgaggtttaaaatgacatcaaagtgtgtctctccagaaggtgctataaa 645
Query: 182 agctcaagccccaacatcatcaccggacagttaagagctctgtcttcaaaggatgttagt 241
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agctcaagcccaaacatcatcaccggacagttaagagctctgtcttcaaaggatgttagt 585
Query: 242 gtctcacatgagcttcagtttgagccaaaagtgcaaactcatcaaatccaagaggatggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtctcacatgagcttcagtttgagccaaaagtgcaaactcatcaaatccaagaggatggt 525
Query: 302 cactaggc-agcatcagcagaggtcttagcacctgttaaatgtcattcactcagcatctt 360
|||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 524 cactagtcga-catcagcagaggtcttagcacctgttaaaagtcattcactcagcatctt 466
Query: 361 caagcataattcccagccatgtctctcattctcagatttggatttgtaccaaaagctaac 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 465 caagcataattcccagccatgtctctcattcttagatttggatttgtaccaaaagctaac 406
Query: 421 attaagtaagggagatcccagagtccaaaaggtttcagatgggaatgtca--ttcaccaa 478
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 405 attaagtaagggagatcccagagtccaaaaggtttcagatgggaatg--atgttcaccaa 348
Query: 479 cggttgcagttgttaaaacagcaggcaatggcaagcaaagctcaccactgagaccacaca 538
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 347 cggttgcagttgttaaaacagcaggcaatggcaag-aaaactcaccactgagaccacaca 289
Query: 539 aggctaaatataaacactttgaatattgatagtgtgaacttgaattgtaccgtcaccacc 598
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 288 aggcaaaatataaacactttgaatattgatagtgggaacttgaattgtaccgtcaccacc 229
Query: 599 accaacaggaaaaattaatgaccaatt 625
| |||||||||||||||||||||||||
Sbjct: 228 aacaacaggaaaaattaatgaccaatt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_i15.g1 MSMg01no131_i15.g1 CHROMAT_FILE:
MSMg01no131_i15.g1 PHD_FILE: MSMg01no131_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:48 2005
(234 letters)
>mm_chr2_3834068_3834698
Length = 631
Score = 395 bits (204), Expect = e-114
Identities = 226/234 (96%), Gaps = 3/234 (1%)
Strand = Plus / Plus
Query: 1 aatagactcacagggttcatactctggcacagaaggcaggcaaggagtatataatgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagactcacagggttcatactctggcacagaaggcaggcaaggagtatataatgacaa 260
Query: 61 ctcattaaatgcttgcttacagtaggtgagctgctgtgaagtttgaactgggtaccgtga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ctcattaaatgcttgcttacagtaggtgagctgctgtgaggtttgaactgggtaccgtga 320
Query: 121 ggatgtgtttcagatttgcagagggagtgaggtaggcatttttgaggcagctgaagctga 180
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ggatgtgtttcagacttgcagagggagagaggtaggcatttttgaggcagctgaagctga 380
Query: 181 actatgggattgtttgtgtgtctagcatgatgtagcataggaactaattttatt 234
||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||
Sbjct: 381 actatgggagtgt--gtgtgtctagcataatgtagcat-ggaactaattttatt 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 631
Length adjustment: 9
Effective length of query: 225
Effective length of database: 622
Effective search space: 139950
Effective search space used: 139950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
