NATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACAAGGTTCCAATGGAGGAGCTAGAGAAAGACCCAAGGAGCTAAA
GGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCC
CGGTGCTCTTGTCTCTAGCTGCATATGTATCAAAAGAAGGTCTAGTTGGC
CATCATTGGGAAGAGAGGCCCATTGGACTTGCAAACTTCATATGCCTCAG
TACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGAGGAGTG
GGGGGGTGNNTNCCTTTTTTTTTTTTTTCCTCTCCACTATTATCTCACTA
ACAGACTTTTTCTCCTCCCCCCCCCCCGGAAAGAGAGCTAATCTTTTTTT
TTTTTTCTCTTTCCTCCCCCCCCCCATTTTATCTTTCCTTTCTTCATCTT
TTTCTCCCACTCTTTTTTTTTTATTTTTTTTTCATCCCCCCCCTTTCCTC
GTATTTCTATTTCCTATCTTTCTCTCCCCATCACATCCTATATCATTCCT
TTTTTTCTTTTCGTTTTTTTTCGTTGCTCCCGCCTTTCTTACTCCCTTTT
TATGATCTCCTTCTTTTTCCTCTTCTCCCTTTTCTCCTTATATCCCTCTC
ACTCCTTCTTATTCGTCCCCTTTTCCCTCTCTCTTTTTATACCCTTACTC
CCTACATTTT

NTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTTCAGAGAAATTCTTCTCATCAAATTAATCCAATTACCCT
GATTTGTTTGTAAGAAAATTACTAAAGTTTATTCCTGTCACAACAATAAA
ATTTTCTGCTGAAAAATCATTTATCAGCATCTTTTTATATTTAAAAATAC
TATAAGAGAAAAAGGCGCAAATTAAATCACACTATTACCAATGGGAGCTG
ACCTTTTTAAATCAAATTTGTTTTAACAGTATTTTCTAATACTGCCTACA
CCCCATTTTTAAATCCAGCCTTCCAAGAATGTTTAGCTTTGTTCAGGAGT
ACACATGCATGCAGAATTTCAAGGAACATTTTATAGATAAATATACTCAA
GACCAGCTCTAGGTAATGATAATGAGAACAGTACAGATTTTAAATGGCTG
CAACTCTCAGACTTGACCTGTCAAGTCAACAGACAGTTGTTCTTCAAGCA
TAGTGTCTTCAAAAATGTTTCTAAAATGACATTTAGGTATTAGAAAGTGT
GTTTTATGAGAAAGAATCTGCCTCCACATTTGCATTTTAAGAAGCCTTGA
CTTACACCCTTGTAATATATGACTAGTGATTATATGTGACATTACCATAT
GATTAAATGAGTAAAAACTGAATATAGAGACAATGG

Query= MSMg01no132_d07.g1 MSMg01no132_d07.g1 CHROMAT_FILE:
MSMg01no132_d07.g1 PHD_FILE: MSMg01no132_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:39 2005
         (574 letters)



>mm_chr2_97457619_97458593
          Length = 975

 Score = 1035 bits (535), Expect = 0.0
 Identities = 565/575 (98%), Gaps = 1/575 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attcttctcatcaaattaatc-caattaccctgatttgtttgtaagaaaattactaaagt 59
           ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 775 attcttctcatcaaattaatcacaattaccctgatttgtttgcaagaaaattactaaagt 716

                                                                       
Query: 60  ttattcctgtcacaacaataaaattttctgctgaaaaatcatttatcagcatctttttat 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttattcctgtcacaacaataaaattttctgctgaaaaatcatttatcagcatctttttat 656

                                                                       
Query: 120 atttaaaaatactataagagaaaaaggcgcaaattaaatcacactattaccaatgggagc 179
           |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 655 atttaaaaatactataagagaaaaagactcaaattaaatcacactattaccaatgggagc 596

                                                                       
Query: 180 tgacctttttaaatcaaatttgttttaacagtattttctaatactgcctacaccccattt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgacctttttaaatcaaatttgttttaacagtattttctaatactgcctacaccccattt 536

                                                                       
Query: 240 ttaaatccagccttccaagaatgtttagctttgttcaggagtacacatgcatgcagaatt 299
           |||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 535 ttaaatgcagccttccaagaatgttgagctttgtgcaggagtacatatgcatgcagaatt 476

                                                                       
Query: 300 tcaaggaacattttatagataaatatactcaagaccagctctaggtaatgataatgagaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcaaggaacattttatagataaatatactcaagaccagctctaggtaatgataatgagaa 416

                                                                       
Query: 360 cagtacagattttaaatggctgcaactctcagacttgacctgtcaagtcaacagacagtt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagtacagattttaaatggctgcaactctcagacttgacctgtcaagtcaacagacagtt 356

                                                                       
Query: 420 gttcttcaagcatagtgtcttcaaaaatgtttctaaaatgacatttaggtattagaaagt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gttcttcaagcatagtgtcttcaaaaatgtttctaaaatgacatttaggtattagaaagt 296

                                                                       
Query: 480 gtgttttatgagaaagaatctgcctccacatttgcattttaagaagccttgacttacacc 539
           | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 295 gcgttttatgagaaagaatctgcctccacatttgcattttaagaaaccttgacttacacc 236

                                              
Query: 540 cttgtaatatatgactagtgattatatgtgacatt 574
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 cttgtaatatatgactagtgattatatgtgacatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space:   544260
Effective search space used:   544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)