Query= MSMg01no133_n18.b1 MSMg01no133_n18.b1 CHROMAT_FILE:
MSMg01no133_n18.b1 PHD_FILE: MSMg01no133_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:47 2005
(312 letters)
>mm_chr2_168335255_168335966
Length = 712
Score = 528 bits (273), Expect = e-154
Identities = 300/309 (97%)
Strand = Plus / Minus
Query: 4 ggaattctgtctgaacctctcaatgaagagctttggaaactcatccaacccccttcttta 63
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 512 ggaattctgtctgaacctctcaatgatgagctttggaaactcatccaacccccttctttc 453
Query: 64 tttcatgtctgtcccctttgtctatttcttgagagtcgctctgtagccaaggctggctcg 123
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttcatgactgtcttttttgtctatttcttgagagtcgctctgtagccaaggctggctcg 393
Query: 124 tctcagcctctcaagtgctccttaaaccggctcatgtggaattagcctcaggactgagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctcagcctctcaagtgctccttaaaccggctcatgtggaattagcctcaggactgagag 333
Query: 184 gctgggcaggaggaaaacccttacagcttcccgtgtgggcttctggctgttagtgagctg 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 332 gctgggcaggagggaaacccttacagcttcccgtgtgggcttctggctgttagtgagttg 273
Query: 244 ggttggaacccatggatcctggctgagtagtctggctctctgtcagtgaccttggaccca 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 272 ggttggaacccatggatcctggctgagtagcctggctctctgtcagtgaccttggaccca 213
Query: 304 tctcacatg 312
|||||||||
Sbjct: 212 tctcacatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_n18.g1 MSMg01no133_n18.g1 CHROMAT_FILE:
MSMg01no133_n18.g1 PHD_FILE: MSMg01no133_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:47 2005
(431 letters)
>mm_chr2_168219391_168220221
Length = 831
Score = 768 bits (397), Expect = 0.0
Identities = 423/433 (97%), Gaps = 4/433 (0%)
Strand = Plus / Plus
Query: 1 ctagggggacacttttgtgaggatgtctggtggtacatatgccaagaagggctgggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagggggacacttttgtgaggatgtctggtggtacatatgccaagaagggctgggatct 260
Query: 61 ggacagtcgatggggctggcactgagatggacagatctatcactctccagcacgccaagg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacagtcgatggggctgtcactgagatggacagatctatcactctccagcacgccaagg 320
Query: 121 gtgcgttcagacaagtcacctccgtggatcgtcacaacgtgttttgtgagggaagaagtc 180
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcgtacaggcaagtcacctccgtggatcgtcacaacgtgttttgtgagggaagaagtc 380
Query: 181 aggtggctttggggacacaagtgatttcagccaccatgccgaatccaatgggtttctctc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aggtggctttggggacacaagtgatttcagccaccatgccgaatccaaggggtttctctc 440
Query: 241 ctcccgtcctgtgcaatggtctccagaagggtggagtcgctggcctgcctgtctctccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcccgtcctgtgcaatggtctccagaagggtggagtcgctggcctgcctgtctctccac 500
Query: 301 tgacacttcacaagtgtttattctagcaaagtta--ttctgaactttgtgtgccacctta 358
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 501 tgacacttcacaagtgtttattctagca--ggtggcttctgaactttgtgtgccacctta 558
Query: 359 tcccctaccgggacaaaggaagaattgctctcccctgagcgccacgtgtggagtcactgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcccctaccgggacaaaggaagaattgctctcccctgagcgccacgtgtggagtcactgt 618
Query: 419 ctgtagaatgtca 431
|||||||||||||
Sbjct: 619 ctgtagaatgtca 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
