Query= MSMg01no134_d23.b1 MSMg01no134_d23.b1 CHROMAT_FILE:
MSMg01no134_d23.b1 PHD_FILE: MSMg01no134_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:28 2005
(407 letters)
>mm_chr2_70733546_70734352
Length = 807
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%)
Strand = Plus / Plus
Query: 1 tggaatgtgttctaggaaatctagcaaaggtgaggaaaactcattggaactcctgaatca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tggaatgtgttctaggaaatctagcaaaggtgaggaaaacccattggaactcctgaatca 260
Query: 61 tttacacaggtatggttagcgtggaagcccgggatactcttatgactgacatctgtgagg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaacacaggtatggttagcgtggaagcccgggatactcttatgactgacatctgtgagg 320
Query: 121 agaaggtcttccggggctgagcccttaacctgtgggggtctttgagaattctggacagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaggtcttccggggctgagcccttaacctgtgggggtctttgagaattctggacagac 380
Query: 181 agtgtcagaaccaaacagacttgcaggataccctcttggcttgagaaaactagcaaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtcagaaccaaacagacttgcaggataccctcttggcttgagaaaactagcaaatag 440
Query: 241 ttttggagcaaggtatttgttgttggaaaagataccataaaggtggtgtgagacaaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttggagcaaggtatttgttgttggaaaagataccataaaggtggtgtgagacaaaagc 500
Query: 301 tgcatgtggatataatacctaaggttagatccagtttccctcagttgactgatgccacat 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 tgcatgtggatataatacctaaggttagatccagtttccctcagttggctgatgccacat 560
Query: 361 tggaggaactgtcctgactgtgttggcctgctcattccttctttgtc 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaggaactgtcctgactgtgttggcctgctcattccttctttgtc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_d23.g1 MSMg01no134_d23.g1 CHROMAT_FILE:
MSMg01no134_d23.g1 PHD_FILE: MSMg01no134_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:28 2005
(389 letters)
>mm_chr2_70860365_70861148
Length = 784
Score = 669 bits (346), Expect = 0.0
Identities = 370/380 (97%), Gaps = 5/380 (1%)
Strand = Plus / Minus
Query: 10 gacaggagaaggaaaagaaacgccatgtggtaacatgtgggcttgaaatggcacactgtt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gacaggagaaggaaaagaaacgccatgtggtaacatgtgggcttgaaatggcacac---- 529
Query: 70 tgcgatacgtgagggcatgcaaccacatctccagctgcagaattaatcaaagctcagacg 129
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 528 tgcgatacgtgagggcatgcaaccacatctccagctgcagaattaatcagagctcagacg 469
Query: 130 aggccgtatttctctgctctgaactgggaggagtaccacaagctaaatgtagtcacgtaa 189
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aggccatatttctctgctctgaactgggaggagtaccacaagctaaatgtagtcacgtaa 409
Query: 190 cgatgggggctacacgttctgagaaacacggcaatagaggatttgctatgatatacacat 249
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 408 cgat-ggggctacacgttctgagaaacagggcaatagaggatttgctatgatatacacat 350
Query: 250 gatagagcgcactacaccagtgtggatggtatagccgtaggtcacagcctgtacacctcg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gatagagcgcactacaccagtgtggatggtatagccgtaggtcacagcctgtacacctcg 290
Query: 310 ataataaacaacctatgaacagtgtcccggcacagctagcccaggctcctgtacaacaac 369
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 289 ataataaacaacctatgaacagtgtccctgcacagctagcccaggctcctgtacaacaac 230
Query: 370 cgtctctgtccatgtgcctg 389
||||||||| ||||||||||
Sbjct: 229 cgtctctgttcatgtgcctg 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 784
Length adjustment: 9
Effective length of query: 380
Effective length of database: 775
Effective search space: 294500
Effective search space used: 294500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
