Query= MSMg01no134_h07.b1 MSMg01no134_h07.b1 CHROMAT_FILE:
MSMg01no134_h07.b1 PHD_FILE: MSMg01no134_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:52 2005
(200 letters)
>mm_chr2_38103318_38103916
Length = 599
Score = 296 bits (153), Expect = 6e-85
Identities = 162/165 (98%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 1 aattgtacataaaatgaatagagtacatctcatttacctttcaatgttatttttctaatg 60
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 201 aattgtacataaaatgaatagagtacatctcagt-acctttcaatgttatttttctaatg 259
Query: 61 aaaggtatgtttcaaagaaaaaggtcatttgtagaaacaagtatcccaagaatacaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaggtatgtttcaaagaaaaaggtcatttgtagaaacaagtatcccaagaatacaagta 319
Query: 121 gaaagaaagagagagagagagagagagagagagagagagagagag 165
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 gaaagaaagagagagagagagagagagagagagagagagaaagag 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 599
Length adjustment: 8
Effective length of query: 192
Effective length of database: 591
Effective search space: 113472
Effective search space used: 113472
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_h07.g1 MSMg01no134_h07.g1 CHROMAT_FILE:
MSMg01no134_h07.g1 PHD_FILE: MSMg01no134_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:53 2005
(380 letters)
>mm_chr2_38257606_38258389
Length = 784
Score = 659 bits (341), Expect = 0.0
Identities = 370/385 (96%), Gaps = 12/385 (3%)
Strand = Plus / Minus
Query: 3 tctttaaaaccagtcttacacctcagattccacatat-------tcccctaggatggagg 55
||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 583 tctttaaaaccagtcttacacctcagattccacatatttatttgt---ctaggatggagg 527
Query: 56 aaaagaactcgggcgggggaagcaggccctggagtcacatcataagctagctgggtaacc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaaagaactcgggcgggggaagcaggccctggagtcacatcataagctagctgggtaaaa 467
Query: 116 actgtgcccagtcccctttacaggagagaaaacagaggctgagggaggctgctattaagt 175
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 466 actgtgcccagtcccctttacaggagagaaaacagaggctgagggaggctgttattaagt 407
Query: 176 gtgtgtccccaaagtagagagctgtcaaaggcagaggggca-attcgacagacgggtgtg 234
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 406 gtgtgtccccaaagtagagagctgtcaaaggcagagggg-agattcgacagacgggtgtg 348
Query: 235 gttacatggcagcacttgacaaccaggaatcatggtggccctacaaggcttccatcgcta 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gttacatggcagcacttgacaaccaggaatcatggtggccctacaaggcttccatcgcta 288
Query: 295 tgctggtgttctccttcctgtcagttataatctttgattcttttatcttaagatggagtc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgctggtgttctccttcctgtcagttataatctttgattcttttatcttaagatggagtc 228
Query: 355 ttgaatgtagtttgcccgaagctca 379
|||||||||||||||||||||||||
Sbjct: 227 ttgaatgtagtttgcccgaagctca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 784
Length adjustment: 9
Effective length of query: 371
Effective length of database: 775
Effective search space: 287525
Effective search space used: 287525
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
