GGCCGCTATACGACTCCTATAGGTCCCAAATCCGCGGAATTCTGTATCTC
ATATTCCGGTCATTCTGCTTCTGTCTCCATAGTGTTATATCATGCCTGCC
TCCATATCATAATTTTAAACTAATTTAAAAAAACTATTTATATAAAATTT
TAAAGTAATTTTTACTATATGTGAATTATATTCAGTAGTGATTTCACTTA
CTGAATAAAATAAAGATAAAATATTGTCTAATAGATATAACATCTCTAGA
ATTGTATCCTTATTACATTATAAAAATGTGGTTCATATTAAACTAAGAAT
AAGTATATAATACATTAAGATCTATCCACTTTCTTCTGGTTAGAGAATAG
GTACAACTTCCTCCCTGAACACAATCCAGTTATATTATTTGTTCTTGGAA
ATGGATTTTGAATATGCCTGTTTGACTAATCAGATGATCATTTTCCTATC
CTTTATTATAAATGCTGAGTGTCAAAGATATTTAGGGACAGGATATATTT
GGCTTTCTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGNTNNN
NNNNNNTTTNNNTTTNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTNTT
TNTTTTTNTTTTTTTTTTTNTNTTTTTTTTTTTTNNTTTTTNTTTTTTTT
TTTTNNTTTTTTTTTTTTTTTNTTTNTNNTTTTTTNTTTTTTTTTTTTTT
TTTTTTTTNNTTTTNTNTNTNNNNTTTTTTTTTTTTTTTN

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
AAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTT
CCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
ACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCA
AAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAAC
TCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCC

Query= MSMg01no135_p18.b1 MSMg01no135_p18.b1 CHROMAT_FILE:
MSMg01no135_p18.b1 PHD_FILE: MSMg01no135_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:13 2005
         (514 letters)



>mm_chr2_99683405_99684318
          Length = 914

 Score =  861 bits (445), Expect = 0.0
 Identities = 502/541 (92%), Gaps = 35/541 (6%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggaattctgtatctcatattcc---ggtcattctgcttctgtctccatagtgttatatca 59
           ||||||||||||||||||   |   |||||||||||||||||||||||||||||||||||
Sbjct: 654 ggaattctgtatctcata---cagaggtcattctgcttctgtctccatagtgttatatca 598

                                                                       
Query: 60  tgcctgcctccatatcataattttaaactaatttaaaaaaactatttatataaaatttta 119
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 597 tgcctgcctccatatcataattttaaactaattaaaaaaaactatttatataaaatttta 538

                                                                       
Query: 120 aagtaatttttactatatgtgaattatattcagtagtgatttcacttactgaataaaata 179
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 537 aagtaatttttactatatgtgaattatattaagtagtgatttcacttactgaataaaata 478

                                                                       
Query: 180 aagataaaatattgtctaatagatataacatctctagaattgtatccttattacattata 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aagataaaatattgtctaatagatataacatctctagaattgtatccttattacattata 418

                                                                       
Query: 240 aaaatgtggttcatattaaactaagaataagtatataatacattaagatctatccacttt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaaatgtggttcatattaaactaagaataagtatataatacattaagatctatccacttt 358

                                                                       
Query: 300 cttctggttagagaataggtacaa--------------------------cttcctccct 333
           ||||||||||||||||||||||||                          ||||| ||||
Sbjct: 357 cttctggttagagaataggtacaactgtaggaaataatacttaagtcactcttcccccct 298

                                                                       
Query: 334 gaacacaatccagttatattatttgttcttggaaatggattttgaatatgcctgtttgac 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaacacaatccagttatattatttgttcttggaaatggattttgaatatgcctgtttgac 238

                                                                       
Query: 394 taatcagatgatcattttcctatcctttattataaatgctgagtgtcaaagatatttagg 453
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 taatcagatgatcattttcctatccttgattataaatgctgagtgtcaaagatatttagg 178

                                                                       
Query: 454 gacaggatatatttggctttctgtttgtttgtttgtttgtttgtttgtttg--tttgttt 511
           |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||
Sbjct: 177 gacaggatatatttggctttctgtttgtttgtttgtttgtttgttt-tttggttttgttt 119

            
Query: 512 g 512
           |
Sbjct: 118 g 118


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)