CCCCNNNATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATC
CGCGGAATTCCACAGGAAACTAAGAAAAAATATTTTTCCTTCCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCC
TTCCTTCCTTCCCTCCTTCCTTTGTTCATTCCTTGCATTCTTCTTTTAAT
TTTTTCTTTCATTTTTCTTTTGTTCTTTCATTCTTTTGTTTTCTTTTAAA
TAAGAGTCACCCTGATTAATATTACTAGATAAGTTTAATAGCTTTTTTTT
TGTTACTGGACTTCTGTAACCTCATTCTGACCTTTTGTGAAAGTTGTCAA
CTTGGTGTTCATGATCTCTGCTTTATCAAACAGTATTAAGTAAAAGAGAT
TACTGTCTATATTTATGATGAGAATGAGTTATATACTGTGAGGGCTGGGG
GTGGGGGGAAGANCNNNNNNCCNNCCCNCNCCCCCCCCCCCCCCCCCCCC
CNCNNNNCNCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCNCCCCCCCCC
CCCCNCCCCCCCCCCCCCCCCNCCNNCCCCCCCCCNCGCCGCCCCCNCCN
CGCCNNNCCCGNNCCCCCGCCGNCGCCCCCCGNGGGGNGCCCCCGCCCCG
CTCCCGCCCCCCTCGTTCGGCGGGGCCGCCCCCCCCGTCCCCNTTCTGCC
GTCCCTTT

CCCCCNNCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGATCC
CCATTTTTTTTTATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAAT
GCTACACCAAAAGTCCCCCATACCCACCCACCCCCACTCCTCTACCCACC
CAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAG
AACTATTCAAAGAATCAACCAATCAAGGAGCTGGTTCTTTGAGAAAATCA
ACAAAATAGATAAACCCTTAGCCAGATTCACTAGAGGGCACAGGGACAAA
ATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCC
TGAAGAAATCCAAAACACCATCAGATCCCTCTACAAAAGGCTATACTCAA
CAAAACTGGAAAACCTGGATGAAATGGACAAGTTTCTAGACAGATACCAG
GGAACAAAAGCTAAATCAAGATCAGGTTTAATGACCTCAACAGTCATATT
TCCCCCTAAAGAAAATAGAAAACCGGCCCTTAATAAGTCCCCCCGGCCAA
AAAAAAAGCCCAGGAAGGAAACGGGTTTTAAGGAAAAATTCTATTAAAAA
CTTCTAAAAAAAAACCAA

Query= MSMg01no136_a15.b1 MSMg01no136_a15.b1 CHROMAT_FILE:
MSMg01no136_a15.b1 PHD_FILE: MSMg01no136_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:18 2005
         (417 letters)



>mm_chr2_97538360_97539177
          Length = 818

 Score =  716 bits (370), Expect = 0.0
 Identities = 400/412 (97%), Gaps = 7/412 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattccacaggaaacta-agaaaaaatatttttccttcccttccttccttccttcctt 63
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattccacaggaaattacagaaaaaatatttttccttcccttccttccttccttcctt 266

                                                                       
Query: 64  ccttccttccttccttccttccttctttccttccttccttccttccttccctccttcctt 123
           ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||
Sbjct: 267 ccttccttccttccttccttcc----ttccttccttccttccttccttccctccttcctt 322

                                                                       
Query: 124 tgttcattccttgcattcttcttttaattttttctttca-tttttcttttgttctttcat 182
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 323 tgttcattccttgcattcttcttttaattttttctttcattttttcttttgttttttcat 382

                                                                       
Query: 183 tcttttgttttcttttaaataagagtcaccctgattaatattactagataagtttaatag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcttttgttttcttttaaataagagtcaccctgattaatattactagataagtttaatag 442

                                                                       
Query: 243 c-tttttttttgttactggacttctgtaacctcattctgaccttttgtgaaagttgtcaa 301
           | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 cttttttttttgttactggaattctgtaacctcattctgaccttctgtgaaagttgtcaa 502

                                                                       
Query: 302 cttggtgttcatgatctctgctttatcaaacagtattaagtaaaagagattactgtctat 361
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 503 cttggtgttcatgatctctgctttctcaaacagtattaagtaaaagagattactgtctat 562

                                                               
Query: 362 atttatgatgagaatgagttatatactgtgagggctgggggtggggggaaga 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atttatgatgagaatgagttatatactgtgagggctgggggtggggggaaga 614


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 818
Length adjustment: 9
Effective length of query: 408
Effective length of database: 809
Effective search space:   330072
Effective search space used:   330072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)