Query= MSMg01no136_b10.b1 MSMg01no136_b10.b1 CHROMAT_FILE:
MSMg01no136_b10.b1 PHD_FILE: MSMg01no136_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:21 2005
(648 letters)
>mm_chr2_179071779_179072826
Length = 1048
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%)
Strand = Plus / Minus
Query: 5 gaattcaccatgacttctattctggctcccaccattcctagcctttggcctcaggtgtgt 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gaattcaccatgatttctattctggctcccaccattcctagcctttggcctcaggtgtgt 789
Query: 65 aactgaacatcctcctgatccatttcctatacctgtgtgttgggaggggcgtgtcgaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aactgaacatcctcctgatccatttcctatacctgtgtgttgggaggggcgtgtcgaact 729
Query: 125 gattatctctatgctcccagaccactgtcggctacaggagaatgtggtctgtccctcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gattatctctatgctcccagaccactgtcggctacaggagaatgtggtctgtccctcaga 669
Query: 185 gattctcggatcagcagaagcccccctacagacactgaggtggtaggaagtaaggaagga 244
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gattcgcggatcggcagaagcccccctacagacactgaggtggtaggaagtaaggaagga 609
Query: 245 aggaagtacatacaggaaggagtaagtcccacttatatagaacccggggcagacataggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aggaagtacatacaggaaggagtaagtcccacttatatagaacccggggcagacataggc 549
Query: 305 tgcaggaagggcctgctgacccctctccgtccccatcctcacccctggccgacattcctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tgcaggaagggcctgctgacccctctccgtccccatcctcacccctggccgacattcctc 489
Query: 365 tgaactgctcctgcttaggacaatgtctcttaaaggatggggacatgaatccatagaggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgaactgctcctgcttaggacaatgtctcttaaaggatggggacatgaatccatagaggg 429
Query: 425 tccctagtacttccggagtctcagctgggcctcaaagcccttcagcacaggtaactgaga 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tccctagtacttacggagtctcagctgggcctcaaagcccttcagcacaggtaactgaga 369
Query: 485 ggtcccatcagggactgtggcctcagaggcagagccaagcaattctcttgaggaaggatt 544
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggttccatcagggactgtggcctcagaggcagagccaagcaattctcttgaggaaggatt 309
Query: 545 tagtgaaggttgaaggtaagtgtgggaacaggatgggatgtcatcctaggctcctggact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tagtgaaggttgaaggtaagtgtgggaacaggatgggatgtcatcctaggctcctggact 249
Query: 605 caaggacactctagatgagcaaaactggagggcctttgatacag 648
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 caaggacactctagatgagcaaaactggagggcctttgatacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_b10.g1 MSMg01no136_b10.g1 CHROMAT_FILE:
MSMg01no136_b10.g1 PHD_FILE: MSMg01no136_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:22 2005
(625 letters)
>mm_chr2_178937822_178938846
Length = 1025
Score = 246 bits (127), Expect = 5e-69
Identities = 133/135 (98%)
Strand = Plus / Plus
Query: 1 tgagactgactgagcttatggcctccatcacagatgtctgagttggtgggggagcctatt 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagactgactgagcttagggcctccatcacagatgtctgagttggtgggggagcctatg 260
Query: 61 gttgagagaacccactgtgcgggtcctcctcaaatcgtcccaggctctgtttcaccctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgagagaacccactgtgcgggtcctcctcaaatcgtcccaggctctgtttcaccctga 320
Query: 121 ttgtcttgattagct 135
|||||||||||||||
Sbjct: 321 ttgtcttgattagct 335
Score = 101 bits (52), Expect = 2e-25
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 569 attagctgacactggccaccctctggtcctattttctcactcttttgtgcctggct 624
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 329 attagctgacactggccaccctctggtcctattttcccactcttttgtgcctggct 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
