NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGCGG
AATTCCTGATCTTTGCAAGACTTTTATCATGAATGGGTGTTGGATTTTGT
CAAATGCTTTCTCAGCATCTAATGAGATGATTATGTGATTTTTGTCTTTG
AGTTTGTTTGTATAATGAATTACATTGATGGATTTCCGTATATAAAACAA
TCCTTGTATCCCTGGGATGAAGCCTACTTTGTCATCATGGATGATCATTT
TAAGTGTTCTTGGATTCAGTTTTCGAGGATTTTATTGCATTGATATTCAT
AAGGGAAATTGTTCTGAAGTTCTCTTTTGTTGTTGTATCTTTGTGTGGTT
TAGGTATCATAGTAATTGTGGTTTCATAGAACGAATTGGGTGGAGTACCT
TCTGTTTCTATTTTGAGGAGAGTTGGAATTAGGTCTTCTTTGAAGGTCTG
ATAGAACTCTGCACTAAACCCATCTGGGACTGTGCTTTTTTTGGCGTGAC
ACTATCGTTGACTGCTTCTATTTCTTTAGGGGATATAGGACTGTTTATAT
TGTTAATCTGATCCCGATTTAACTTCGTTACCTGGCATCTGTCTAGGAAG
TTGTCCATCTCATCCATGCTTTCCAGTTTTGTTGTCTATAGCCATTCATA
GTAGGATCTGATGATGCTTTGTATTTCCCTACGCTATCTTGTTATGTCTC
CTTTTTTATTTCCGACCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTAGCCAGCACTTTTTGGAGGAAAAATAAATGCA
ATGTATAAGAAGTGGAAAGACAGAATGAATATGTTATATTATCTGAGGTG
ACAAAATTGTTTCTAGAAATTATTTTTAAAAAATCACCAACTGTTAGAAT
AAAAGGTCCAGCTCATTGTTCCAGAGGAACAAACCACATGATAATAAACA
AACAAACAAACAAACAAACTGAAAGGTGTTCTAGTGCCACCAAACATCTA
AGAACTATAAATAAATATAGCAAAGCATGCGCTGGACGCTAACAGGAAGT
CACAGTGTGCCGCCGATAGAAGCTAAAGAAAATCAAGGAAACTGTGAAAG
CCTTACAGGGTCCTCTATTTTAACCATGTATGCATTTTTAAATCTCATTT
TATAATTTATATAAATGTGAGGAATAATTAAAACAATTGAGAGAAAGTTG
AGCTGTTAATACAAAAGATCTGATGAATGGGCACAAAGACAGAAAATAAA
GCAAGTGGACAATACTGACCAGAGATTGAGAGACAAATCAGACTGATCCC
AAAACTGTATAAGATAGAGACTGTAATCAGCTGATCATGTGAGAAATAAA
CATATTGTACTGTGTTTCATATCTGCACAGAGATCAACTCCATGTGGGTC
AAAAGTA

Query= MSMg01no137_h08.g1 MSMg01no137_h08.g1 CHROMAT_FILE:
MSMg01no137_h08.g1 PHD_FILE: MSMg01no137_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:09 2005
         (641 letters)



>mm_chr2_21429488_21430528
          Length = 1041

 Score = 1218 bits (630), Expect = 0.0
 Identities = 636/638 (99%)
 Strand = Plus / Minus

                                                                        
Query: 4    gccagcactttttggaggaaaaataaatgcaatgtataagaagtggaaagacagaatgaa 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gccagcactttttggaggaaaaataaatgcaatgtataagaagtggaaagacagaatgaa 982

                                                                        
Query: 64   tatgttatattatctgaggtgacaaaattgtttctagaaattatttttaaaaaatcacca 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981  tatgttatattatctgaggtgacaaaattgtttctagaaattatttttaaaaaatcacca 922

                                                                        
Query: 124  actgttagaataaaaggtccagctcattgttccagaggaacaaaccacatgataataaac 183
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 921  actgttagaataaaaggtccagctcattgttccagagtaacaaaccacatgataataaac 862

                                                                        
Query: 184  aaacaaacaaacaaacaaactgaaaggtgttctagtgccaccaaacatctaagaactata 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  aaacaaacaaacaaacaaactgaaaggtgttctagtgccaccaaacatctaagaactata 802

                                                                        
Query: 244  aataaatatagcaaagcatgcgctggacgctaacaggaagtcacagtgtgccgccgatag 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  aataaatatagcaaagcatgcgctggacgctaacaggaagtcacagtgtgccgccgatag 742

                                                                        
Query: 304  aagctaaagaaaatcaaggaaactgtgaaagccttacagggtcctctattttaaccatgt 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741  aagctaaagaaaatcaaggaaactgtgaaagccttacagggtcctctattttaaccaggt 682

                                                                        
Query: 364  atgcatttttaaatctcattttataatttatataaatgtgaggaataattaaaacaattg 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  atgcatttttaaatctcattttataatttatataaatgtgaggaataattaaaacaattg 622

                                                                        
Query: 424  agagaaagttgagctgttaatacaaaagatctgatgaatgggcacaaagacagaaaataa 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621  agagaaagttgagctgttaatacaaaagatctgatgaatgggcacaaagacagaaaataa 562

                                                                        
Query: 484  agcaagtggacaatactgaccagagattgagagacaaatcagactgatcccaaaactgta 543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561  agcaagtggacaatactgaccagagattgagagacaaatcagactgatcccaaaactgta 502

                                                                        
Query: 544  taagatagagactgtaatcagctgatcatgtgagaaataaacatattgtactgtgtttca 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501  taagatagagactgtaatcagctgatcatgtgagaaataaacatattgtactgtgtttca 442

                                                  
Query: 604  tatctgcacagagatcaactccatgtgggtcaaaagta 641
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 441  tatctgcacagagatcaactccatgtgggtcaaaagta 404


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)