Query= MSMg01no138_c23.b1 MSMg01no138_c23.b1 CHROMAT_FILE:
MSMg01no138_c23.b1 PHD_FILE: MSMg01no138_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:08 2005
(643 letters)
>mm_chr2_171597906_171598948
Length = 1043
Score = 1174 bits (607), Expect = 0.0
Identities = 634/643 (98%)
Strand = Plus / Plus
Query: 1 cctgtttatgaccaggagctaaaactggaaactgactaaggccttctgagtaagcagagc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 cctgtttatgaccaggagctaaaactggaaactgattaaggccttctgagtaagcagagc 260
Query: 61 aaaactgtgccctggatacttacacactgctgtgcatgcgtctcaggtgaacatctgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaactgtgccctggatacttacacactgctgtgcatgcgtctcaggtgaacatctgacc 320
Query: 121 tcaaatctcccactgtttcccgcaacagccacccaaatggacagtggaatccatcgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaatctcccactgtttcccgcaacagccacccaaatggacagtggaatccatcgactt 380
Query: 181 gaaggttcctcttagggagatgataccctgtcagttagaagtgaattcactcacctgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaggttcctcttagggagatgataccctgtcagttagaagtgaattcactcacctgttt 440
Query: 241 gctgttcttccattttttcagtaaatttactattttcacacattgtataataatgaggct 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgttcttccatcctttcagtaaatttactattttcacacattgtataataatgaggct 500
Query: 301 aacacatttacagcaaaggaaaattggcttctctccccaccatccagtaaattccatgta 360
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aagacatttacagcaaaggaaaattggcttctctccccaccacccagtaaattccatgta 560
Query: 361 gataatatacttttaaagttcaagcgagcattggagaaagcataggtgactgggttaatg 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 gataatatacttttaaagttcaagcgagcattggaaaaagcataggtgactgggttaatg 620
Query: 421 tgtccatggataagtaggcattcatctcaagctgtgtccattaccgagggcaggaactca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtccatggataagtaggcattcatctcaagctgtgtccattaccgagggcaggaactca 680
Query: 481 gcctccttgctacccactgatgctttggaagaaggcacataaatgatagctagccagcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcctccttgctacccactgatgctttggaagaaggcacataaatgatagctagccagcat 740
Query: 541 gctgttgcccagagtgaacctcagtccctaaatcagagagagaacaatccaaccaagccc 600
|||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||
Sbjct: 741 gctgttgcccagagtgaacctcggtccttaaatcagagagagaataatccaaccaagccc 800
Query: 601 cttcggagcaaagctactgaggagtacaaaagcatcttttaga 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttcggagcaaagctactgaggagtacaaaagcatcttttaga 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_c23.g1 MSMg01no138_c23.g1 CHROMAT_FILE:
MSMg01no138_c23.g1 PHD_FILE: MSMg01no138_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:08 2005
(635 letters)
>mm_chr2_171748150_171749184
Length = 1035
Score = 1071 bits (554), Expect = 0.0
Identities = 618/644 (95%), Gaps = 12/644 (1%)
Strand = Plus / Minus
Query: 1 atggggctttgaactcagattctcatgcttgcatggcaaacactttacccagcaagccat 60
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1006 atggggctttgaactcagattctcatgcttgcatagcaaacacgttacccagcaagccat 947
Query: 61 ctctctagcccctgcctttcaagtttccagggcttgttcacgttcttcaactcctggccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ctctctagcccctgcctttcaagtttccagggcttgttcacgttcttcaactcctggccc 887
Query: 121 cttccagatcaaataatcacaactcggaacataagatggtgactttttgttgctgttgtt 180
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 886 cttccagatcaaataatcacaactctgaacataagatggtgactttttgttgttgttgtt 827
Query: 181 tgttttgttttttggttctgctctacctcctcatccaggaccctgtgattacactggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tgttttgttttttggttctgctctacctcctcatccaggaccctgtgattacactggatt 767
Query: 241 tatccatgtgtatttagggtcatctctcttctcaaggtcacctttatcacaactccaaac 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tatccatgtg-acccagggtcatctctcttctcaaggtcacctttatcacaactccaaac 708
Query: 301 ctccttggtgacttttgaagcaggacagacattttagggggactggcgaccccagaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 707 ctccttggtgacttttgaagcaggacagacattttagggggactggcgaccccggaaggc 648
Query: 361 ctgtgtaaatcaacaaaccacggtcaacacaccatttcctctatgatttcattttatttg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 647 ctgtgtaaatcaacaaaccacggtcaacacaccatttcctctatgatttcattttacttg 588
Query: 421 cttgtctgttgattgcatcaaagaccttagaacg-g-taggggcagatccttaaacacaa 478
||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 587 cttgtctgtcgattgcatcaaagaccttaga--gtgctaggggcagatccttaaacacaa 530
Query: 479 tacactttaaaataaattaataaggtctaaggagatggctcaatgggaaaaatgtttacc 538
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 529 tacactttaaaataaattaataaggtctaaggagattgctcaatgggaaaaatggttacc 470
Query: 539 acaacag-------tcttgagttcagatcccttgaaccgatggtgaatgaagcacgtgtc 591
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acaacagcatggagtcttgagctcagatcccttgaaccgatggtgaatgaagcacgtgtc 410
Query: 592 tgtgatctcagtgcatgtatggaaacacatatctgtaatctcag 635
|||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 409 tgtgatctcagtgcatgtatgggaacacatatctgtaatctcag 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
