Query= MSMg01no138_k07.b1 MSMg01no138_k07.b1 CHROMAT_FILE:
MSMg01no138_k07.b1 PHD_FILE: MSMg01no138_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:44 2005
(607 letters)
>mm_chr2_95758495_95759502
Length = 1008
Score = 1075 bits (556), Expect = 0.0
Identities = 592/604 (98%), Gaps = 1/604 (0%)
Strand = Plus / Minus
Query: 5 ggaattcctgtg-ttacattgccagcattctcaattcagagcagacatatcttaatacac 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ggaattcctgtgaatatattgccagcattctcaattcagagcagacatatcttaatacac 749
Query: 64 atagtactgctttgtaactcagggatctgtttaggctccaccctgctactcatcatcctt 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 748 atagtactgctttgtaactcagggatctgtttaggctccaccttgctactcatcatcctt 689
Query: 124 gagtattctttggaagccaaagtttcatttgtctctgcatatctacaactggaatacaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gagtattctttggaagccaaagtttcatttgtctctgcatatctacaactggaatacaaa 629
Query: 184 ttgttaggtctcagttttgtgatggagaagaaattgctatgcaaagcaccctagaccacg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttgttaggtctcagttttgtgatggagaagaaattgctatgcaaagcaccctagaccacg 569
Query: 244 ctgtcaattacttgaaaatattggacagatttcatgagaaagattttcctctagtcttca 303
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctgtcaatgacttgaaaacattggacagatttcatgagaaagattttcctctagtcttct 509
Query: 304 aattccaggctctcaggcagctcaggattcccaggatggagagtcctccaggagtgctga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aattccaggctctcaggcagctcaggattcccaggatggagagtcctccaggagtgctga 449
Query: 364 accctgacagttacctagtgttgatatctgtggcagcagcttgatcagagcaggaagcca 423
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 448 accctgacagttacctagtgttgagagctgtggcagcagcttgatcagagcaggaagcca 389
Query: 424 caggtcagtgctatttagagagttcatgtgagcccagtagaagaccttattgtactaggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caggtcagtgctatttagagagttcatgtgagcccagtagaagaccttattgtactaggt 329
Query: 484 tattgtgcctgctcctttaaagcaactataggcctctttgctttattttaacacaatctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 328 tattgtgcctgctcctttaaagcaactataggcctctttgctttattttaacataatctg 269
Query: 544 catcttgctgggaactttggatagtagttgccaggaattaattataagaatagaacatcc 603
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 268 catcttgctgggaactttggatagtagttgccaggaattaattatacgaatagaatatcc 209
Query: 604 atgg 607
||||
Sbjct: 208 atgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1008
Length adjustment: 10
Effective length of query: 597
Effective length of database: 998
Effective search space: 595806
Effective search space used: 595806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_k07.g1 MSMg01no138_k07.g1 CHROMAT_FILE:
MSMg01no138_k07.g1 PHD_FILE: MSMg01no138_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:44 2005
(467 letters)
>mm_chr2_95613633_95614499
Length = 867
Score = 760 bits (393), Expect = 0.0
Identities = 453/483 (93%), Gaps = 18/483 (3%)
Strand = Plus / Plus
Query: 1 tgtgggtgataggagataatccagtatggaaggagaggagttaaaggaagatagagtatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 187 tgtgggtgataggagataatccagtatggagggagaggagttaaaggaagatagagtatg 246
Query: 61 gaaaggatcaaccaatgtgaagtgtgcaaaagaatgccataacgaattcttcctttctag 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 247 gaaaggatcaaccaatgtgaagtgtgcaaaagaatgccataaggaattcttcctttctag 306
Query: 121 gcttagcaaaaactaaagaga--gagagagagagagagagagagagagagagagagagag 178
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcttagcaagaactaaagagacagagagagagagagagagagagagagagagagagagag 366
Query: 179 agagagagagagagagtcag--------------tcctggtgaattgaaggaatttaggt 224
|||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 367 agagagagagagagag--agagagagagagaaggtcctggtgaattgaaggaatttaggt 424
Query: 225 cttgaggtccaaagaacacttctttattgtagaatttccttatagaatctatgtgttcag 284
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 425 cttgaggtccaaagaacacttctttagtgtagaacttccttatagaatctatgtgttcag 484
Query: 285 aggatatacattttgcaggtattaacacatggccaattatttttcaaatggtatgaatac 344
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 485 aggatatagattttgcaggtattaacacatggtcaattatttttcaaatgatatgaatac 544
Query: 345 aacttgtctctattaagaaaatttaactccttttcaattaaaatgttttgtaaaacctaa 404
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aacttgtctctactaagaaaatttaactccttttcaattaaaatgttttgtaaaacctaa 604
Query: 405 atcatgaagataattttgttaataatggaaattaaagatgttttgtcaatctgagctaat 464
|||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 605 atcatgaaaataattttgttaataatagaaatgaaagatgttttgtcaatctgagctaat 664
Query: 465 ttt 467
|||
Sbjct: 665 ttt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 96
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
