Query= MSMg01no138_m03.b1 MSMg01no138_m03.b1 CHROMAT_FILE:
MSMg01no138_m03.b1 PHD_FILE: MSMg01no138_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:53 2005
(573 letters)
>mm_chr2_121112308_121113280
Length = 973
Score = 1062 bits (549), Expect = 0.0
Identities = 565/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 5 gaattcctggtcttcccgcttctaattcccaagtgcaaggctaacagatgtgtgccacta 64
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 203 gaattcctggtcttcctgcttctaattcccaactgcaaggctaacagatgtgtgccacta 262
Query: 65 taccactcttctttattcagctttctaagtctttcccatgtgtttcctgtcgttataaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taccactcttctttattcagctttctaagtctttcccatgtgtttcctgtcgttataaat 322
Query: 125 tctggtgcacagggtctgaagactccatggttaagagtgattgttgctcttgcagaggac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctggtgcacagggtctgaagactccatggttaagagtgattgttgctcttgcagaggac 382
Query: 185 caaagtttgtctccagcatctacactgggcatcttttttttttttttttttt--cgagac 242
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 383 caaagtttgtctccagcatctacactgggcatctttttttttttttttttttttcgagac 442
Query: 243 agggtttctctttatagccctggctgtcctggaactcattttgtagatcaggctggcctc 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 agggtttctctttatagccctggctgtcctggaactcactttgtagatcaggctggcctc 502
Query: 303 gaactcagaaatccacctgcctctgcctcccgagtgctggaattaaaggcgtgcgccacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaactcagaaatccacctgcctctgcctcccgagtgctggaattaaaggcgtgcgccacc 562
Query: 363 actgcccggctacactgggcatcttacaacctcctgcaatgccacttctttcagcctcca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actgcccggctacactgggcatcttacaacctcctgcaatgccacttctttcagcctcca 622
Query: 423 tggctaccgaaacacgcgtgctaatatacaacagaggcacagacagacaaaaattaatta 482
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggctaccgaaacacgcgtgctcatatacaacagaggcacagacagacaaaaattaatta 682
Query: 483 atatctgtccaagtattttggagcatgcctttaatttaagcacttggaaggcagagacag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atatctgtccaagtattttggagcatgcctttaatttaagcacttggaaggcagagacag 742
Query: 543 gtaaatctctgagttcaagcgcagcctggtc 573
|||||||||||||||||||||||||||||||
Sbjct: 743 gtaaatctctgagttcaagcgcagcctggtc 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_m03.g1 MSMg01no138_m03.g1 CHROMAT_FILE:
MSMg01no138_m03.g1 PHD_FILE: MSMg01no138_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:54 2005
(627 letters)
>mm_chr2_121247147_121248173
Length = 1027
Score = 888 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Minus
Query: 1 tcttcacaagaattcacaagctcttaacttgcttgtttataacaatgccaacaacatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcttcacaagaattcacaagctcttaacttgcttgtttataacaatgccaacaacatgct 400
Query: 61 tagctacagacagcatgtgacactatgccatagtgacattacagggcattcctttttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tagctacagacagcatgtgacactatgccatagtgacattacagggcattcctttttgaa 340
Query: 121 tagtgccattttgtttagtctacaatataatcctcatagatctgcatttttggggccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tagtgccattttgtttagtctacaatataatcctcatagatctgcatttttggggccaaa 280
Query: 181 ggaacaactcagtgtttcttttccttttcgtttttttcaagataggtttctctatcttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggaacaactcagtgtttcttttccttttcgtttttttcaagataggtttctctatcttga 220
Query: 241 gatagatagtggttagggtgttctgactgtcctggaactctctatgcagactgggctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gatagatagtggttagggtgttctgactgtcctggaactctctatgcagactgggctggt 160
Query: 301 cttgggctcaaagatctgcctggttctgcctctcacaagtgctgggatatttaaaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cttgggctcaaagatctgcctggttctgcctctcacaagtgctgggatatttaaaggaaa 100
Query: 361 aaaaagaaggtgcgcacacatggcaattatttttattatattaaaataattggaatctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aaaaagaaggtgcgcacacatggcaattatttttattatattaaaataattggaatctgt 40
Query: 421 atcttattaacagttcaaatataatcatggaaccactga 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atcttattaacagttcaaatataatcatggaaccactga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
