Query= MSMg01no139_d02.b1 MSMg01no139_d02.b1 CHROMAT_FILE:
MSMg01no139_d02.b1 PHD_FILE: MSMg01no139_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:30 2005
(260 letters)
>mm_chr2_158265329_158265988
Length = 660
Score = 449 bits (232), Expect = e-130
Identities = 235/236 (99%)
Strand = Plus / Plus
Query: 25 ttttttttttttttttttttttagctttaagcttatttttatacagatttagtgtttaat 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ttttttttttttttttttttttagctttaagcttatttttatacagatttagtgtttaat 284
Query: 85 ttgtatgcattctgcatggagtgttttccaaatgtattattgctggatagcttattcagg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttgtatgcattctgcatggagtgttttccaaatgtattattgctggatagcttattcagg 344
Query: 145 actaaatggctcatgggaagttgcataaagatttatgcttgactctgcatctattaagcc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actaaatggctcatgggaagttgcataaagatttatgcttgactctgcatctattaagcc 404
Query: 205 ttctatcattacaaaacaatttatattttatgggtagtaataaaagatttcagagt 260
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 405 ttctatcattacaaaacaatttatattttatgtgtagtaataaaagatttcagagt 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no139_d02.g1 MSMg01no139_d02.g1 CHROMAT_FILE:
MSMg01no139_d02.g1 PHD_FILE: MSMg01no139_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:30 2005
(345 letters)
>mm_chr2_158437936_158438680
Length = 745
Score = 603 bits (312), Expect = e-177
Identities = 330/340 (97%), Gaps = 7/340 (2%)
Strand = Plus / Minus
Query: 1 caaatccttcagcggaggagtgccatgttcctgatggaaacgggactgggataggggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caaatccttcagcggaggagtgccatgttcctgatggaaacgggactgggataggggttg 373
Query: 61 ggattagaggttataggtggcagcctagggattagaggttacaggtttgaaggcctagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggattagaggttataggtggcagcctagggattagaggttacaggtttgaaggcctagga 313
Query: 121 cccttctcagtctctggagcagcttggcctgctgtggaggaggcactcaggtttctgcgg 180
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 312 cccttctcaggctctggagcagcttggcctgctgtggaggaggctctcaggtttctgcgg 253
Query: 181 tgcagccgggatttccggcaagaggagctagtcttcgcagcttcgtactgcgtactgcgg 240
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 252 tgcagccgggatttccagcaagaggagctagtcttcgcagctt-------cgtactgcgg 200
Query: 241 agtccctctaccatagacgttcctatgtacctgtatctgtatgtgtccaacagagctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 agtccctctaccatagacgttcctatgtacctgtatctgtatgtgtccaacagagctgca 140
Query: 301 ccagccaagtgggtgctgtctgcttgagtgtgtgtgtgcg 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ccagccaagtgggtgctgtctgcttgagtgtgtgtgtgcg 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
