Query= MSMg01no140_b15.b1 MSMg01no140_b15.b1 CHROMAT_FILE:
MSMg01no140_b15.b1 PHD_FILE: MSMg01no140_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:43 2005
(652 letters)
>mm_chr2_31042627_31043680
Length = 1054
Score = 936 bits (484), Expect = 0.0
Identities = 536/554 (96%), Gaps = 6/554 (1%)
Strand = Plus / Minus
Query: 8 gaattcttggtcctccgggacaataattctaagtagctgatatcgagactagaggtcaga 67
|||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 550 gaattctttgtcctcagggacaataattctaagtagctgatatcgagattagaggtcaga 491
Query: 68 gtggcaagaagtgcagacttcagagacca-tgcggtccaggaaggggctagctagcctag 126
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 490 gtggcaagaagtgcagacttcagagaccacgggggtccaggaaggggctagctagcctag 431
Query: 127 ggcctcctgaggctcatctgcttccttgccttgtttctaattccacagtaaggctttgtc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggcctcctgaggctcatctgcttccttgccttgtttctaattccacagtaaggctttgtc 371
Query: 187 ttgtgttttcagccctgtccttgggctcttagcagactatagacaatttttcaagtgact 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgtgttttcagccctgtccttgggctcttagcagactatagacaatttttcaagtgact 311
Query: 247 taaatgagaccccactgtgcatcaggcaggtttatgatttatggtattc-ccttttagtg 305
|||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||
Sbjct: 310 taaatgagaccccactgtgcatcaagcaggtttatgatttacggtattaaccttttagtg 251
Query: 306 aataccatgagctatgatgcagaaataaagatgaggcatgttagggctggagagacagct 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 aataccatgagctatgatgcagaaataaagatgaggcatgttagggctggagagacag-t 192
Query: 366 ggagagacagttaagtgtgcttgccaagcaatcatgaggctcaggtcagatcccagcatc 425
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 --acag-cagttaagtgtgcttgccaagcaatcatgaggctcaggtcagatcccagcatc 135
Query: 426 cacctaagaagccaggtgtcctgaacacaattataaccctagctcagctcggagtgggat 485
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 134 cacctaagaagccaggtgtcctgaacacaattataaccctagctcagctcggtgtgggat 75
Query: 486 ggagacaggatgatggctgggcttgctagcctagtctagaaatgaaaaccccaattccaa 545
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 74 ggaaacaggatgatggctgggcttgctagcctagtctagaaatgaaaagcccaattccaa 15
Query: 546 ctggacctcaattt 559
||||||||||||||
Sbjct: 14 ctggacctcaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1054
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1044
Effective search space: 670248
Effective search space used: 670248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_b15.g1 MSMg01no140_b15.g1 CHROMAT_FILE:
MSMg01no140_b15.g1 PHD_FILE: MSMg01no140_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:43 2005
(632 letters)
>mm_chr2_30963807_30964838
Length = 1032
Score = 1214 bits (628), Expect = 0.0
Identities = 631/632 (99%)
Strand = Plus / Plus
Query: 1 aaggaggaactcaaccagaaactgtggagggtgctgactgcctgcttgttcagagccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaggaactcaaccagaaactgtggagggtgctgactgcctgcttgttcagagccttg 260
Query: 61 tgcttagctagctttcttatgaggtccaggaccacccgtctagggaatggtgctacccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttagctagctttcttatgaggtccaggaccacccgtctagggaatggtgctacccac 320
Query: 121 agtgggctggatcctcccgaaacaatgaacaatcaaagcaagcacccacaatcatgtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgggctggatcctcccgaaacaatgaacaatcaaagcaagcacccacaatcatgtcca 380
Query: 181 caagccgatctggtgtgcacattccctcaattgagactctttttcttaggtgacactatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagccgatctggtgtgcacattccctcaattgagactctttttcttaggtgacactatc 440
Query: 241 aagttgacagctaatgctgagattactggcttacggtcaccatctatagatcaatgacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 aagttgacagctaatgctgagattactggcttacggtcaccatctatagattaatgacct 500
Query: 301 tagccttgcttgtagccaggagcagagaacaaagaagtgtcaacttaggacacacggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagccttgcttgtagccaggagcagagaacaaagaagtgtcaacttaggacacacggagt 560
Query: 361 cttgtgccactaaaatgccctgaagataactcctgtgaaaagtgttggtccttacaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttgtgccactaaaatgccctgaagataactcctgtgaaaagtgttggtccttacaaccc 620
Query: 421 atcttttaaaatgttgtcgtaaaaatcaaaggacgaagatttaaaattctcatcactttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcttttaaaatgttgtcgtaaaaatcaaaggacgaagatttaaaattctcatcactttt 680
Query: 481 tttttggttctcgatccacccccacgcctcccagagtccattgtaagaaacactgctcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttttggttctcgatccacccccacgcctcccagagtccattgtaagaaacactgctcag 740
Query: 541 aagattatttatttatgttatctctacaggaggcttgctgagcaaatgagcggggtaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagattatttatttatgttatctctacaggaggcttgctgagcaaatgagcggggtaaac 800
Query: 601 aagacggcaggtttctgtaaacaaccggaaga 632
||||||||||||||||||||||||||||||||
Sbjct: 801 aagacggcaggtttctgtaaacaaccggaaga 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
