Query= MSMg01no142_d12.b1 MSMg01no142_d12.b1 CHROMAT_FILE:
MSMg01no142_d12.b1 PHD_FILE: MSMg01no142_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:36 2005
(293 letters)
>mm_chr2_58313588_58314285
Length = 698
Score = 493 bits (255), Expect = e-144
Identities = 283/295 (95%), Gaps = 5/295 (1%)
Strand = Plus / Minus
Query: 1 acattacttacactctgtccagcggtcaaaaggtcttagccaaggagggctctagggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 495 acattacttacactctgtccagcggtcaaaaggtcttagccaaggagggctctagtgctt 436
Query: 61 aatgctgtgctctgaacatctacattactggtgccttcataataatatagttacataata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aatgctgtgctctgaacatctacattactggtgccttcataataatatagttacataata 376
Query: 121 gttactcaggtaagtcagcaaca-----gccccacctcacagggttatgataggatttgg 175
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 375 gttactcaggtaagtcagcaacagccatgccccacctcacagggttatgataggatttgg 316
Query: 176 gcagtgctagaacaatctcaaatgaaaggactccggtgtgggctgccgttaccgtgcaat 235
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcagtgctagaacaatctcagatgaaaggactccggtgtgggctgccgttaccgtgcaat 256
Query: 236 agggcaaatcttggctggggtttatgattttcattgatgagggagggagatgggg 290
||||||||||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct: 255 agggcaaatcttggctgtggtttatgagactcaatgatgagggagggagatgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 698
Length adjustment: 9
Effective length of query: 284
Effective length of database: 689
Effective search space: 195676
Effective search space used: 195676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no142_d12.g1 MSMg01no142_d12.g1 CHROMAT_FILE:
MSMg01no142_d12.g1 PHD_FILE: MSMg01no142_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:01:37 2005
(313 letters)
>mm_chr2_58203304_58204016
Length = 713
Score = 507 bits (262), Expect = e-148
Identities = 300/314 (95%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 1 gtagatgtttgtattgttcacgttctaggttaa--aggaagccctcaccccttgagatcc 58
||||||||||||||||||||||||||||| | ||||||||||||| |||||||||
Sbjct: 201 gtagatgtttgtattgttcacgttctagg--gaccaggaagccctcacgttttgagatcc 258
Query: 59 aactctcaaaaacccaagaaatatacagaagtcagagtcatagttgtgtcttctccttca 118
|||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 259 aactctcaaaaaaccaagaaatatatagaagtcagagtcatagttttgtcttctccttca 318
Query: 119 gaaacaaatccagaaaaagttactgcggcctcagcacagagaaggaactctgcattcctt 178
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 319 gaaacaaatccagaaaaagttactgtggcctcagcacagagaaggaactctgcattcctt 378
Query: 179 cccagagacccagtgcctgtgccttacttcacatcattgtcacctgtgttcctcacagct 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 379 cccagagacccagtgcctgtgccttacttcacatcattgtcacctgtgttcctcacagtt 438
Query: 239 tgcctgagagctgtactaatgtggaaagggaccctgggggcctagatctgcctcttccat 298
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 439 tgcctgagagctgtactaatgtggaaaggaaccctgggggcctagatctgcctcttccat 498
Query: 299 agtgcctacttgtc 312
||||||||||||||
Sbjct: 499 agtgcctacttgtc 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
