Query= MSMg01no143_e10.b1 MSMg01no143_e10.b1 CHROMAT_FILE:
MSMg01no143_e10.b1 PHD_FILE: MSMg01no143_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:47 2005
(324 letters)
>mm_chr2_72170720_72171442
Length = 723
Score = 557 bits (288), Expect = e-163
Identities = 309/316 (97%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 9 ttctttttttcttttactctcagaatctagactaggaatcttccagaacccttataataa 68
|||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 209 ttcttttttt-tttcactctcagaatctagactaggaatcttccagaatccttataataa 267
Query: 69 tagaggttacggctgtgttaactttttacattgggagagtatccttggtgtttaggtata 128
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 268 tagaggttacagctgtgttaactttttacattgggagagtatccttggtgttgaggtata 327
Query: 129 gcatgatatacatgtaaggagatgattcctcctctgtttgggaaggcgggcagccatatc 188
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 328 gcatgatatacatgtaaggagatgatccctcctctgtttgggaaggcgggcagccatatc 387
Query: 189 atgggccaagaaaaaaaaaaggcatttcttttcactcacctgtcaggctgagatgttttt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgggccaagaaaaaaaaaaggcatttcttttcactcacctgtcaggctgagatgttttt 447
Query: 249 tctgtataagcaagtttatatatgaatgagattgtctggtaatcatatttaatagtgaga 308
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 448 tctgtataagcaagtttatatatgaaggagattgtctggtaatcatatttaatagtgaga 507
Query: 309 agtgttttctgtcagc 324
||||||||||||||||
Sbjct: 508 agtgttttctgtcagc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_e10.g1 MSMg01no143_e10.g1 CHROMAT_FILE:
MSMg01no143_e10.g1 PHD_FILE: MSMg01no143_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:47 2005
(330 letters)
>mm_chr2_72325576_72326305
Length = 730
Score = 603 bits (312), Expect = e-177
Identities = 325/334 (97%), Gaps = 8/334 (2%)
Strand = Plus / Minus
Query: 1 aggaccttcagaagagcagtcagtgctcttaaccgctgaactatctctccagccctagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aggaccttcagaagagcagtcagtgctcttaaccgctgaactatctctccagccctagtt 540
Query: 61 tggat--------tcttaagatttgatctctaacaactgacttcttttgaatccaggtac 112
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tggattcttaagatcttaagatttgatctctaacaactgacttcttttgaatccaggtac 480
Query: 113 caagtaagcaactttcagcttggtccttcctaagtgtggagcagagaactatggcttccc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 caagtaagcaactttcagcttggtccttcctaagtgtggagcagagaactatggcttccc 420
Query: 173 atcgaagtatggtataaacaggatactggcttttttcttcctatacagtaccaggctaga 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atcgaagtatggtataaacaggatactggcttttttcttcctatacagtaccaggctaga 360
Query: 233 catatcttaggtgtgtggcttacagtgccatactgtttcatacttgagtgtttattgatg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 catatcttaggtgtgtggcttacagtgccatactgtttcatacttgagtgtttattgatg 300
Query: 293 aaagtacaacacatgtatgcctggtgcccaagtt 326
||||||||||||||||| ||||||||||||||||
Sbjct: 299 aaagtacaacacatgtacgcctggtgcccaagtt 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
