ATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAGATGCCGCGG
AATTCAGACATGTCCCTTGTATGCACCATTAATCCCTAATAATGGAGGTA
AAGTTAATTTGTGGAAGGAAACAGCCATGCTTGTAAGTAACATCTAGTTG
AGGAACAGACAATGTAATGAATCAGACAAAGATTTACAGCATGAGTTAGA
GATAGGTTACACCTCATGTGAACAGCACAGGAAAGAGAAGTAAATTAATA
GACCAGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGATAGAGAGAGGNNTNNTTNNNCTTNNNCTC
NNNTTTTTTNNNNTTTTTCCCCCCCCCCCCCCTCCGTTTTTTTTTTTTTT
TTTTTTTTTTTCGGTTTTTGTCCCCCCCTCCCANAATTTTATTTATTGTT
TTTATGTTATAATTTTTATTTTTTTTATTTTATTATATATTCACAATTTT
TTGACGTTATATTACACCGCCAACAGTTCTTGCGCTTATTTAAATCTTAT
TTTCTCTCGCGCCTACACTCTTAGTAATATCTCTCCGACCTATCTATATT
ACTCCTTTTATATTTTCCCTCTTTCTTCCTCTTTACCTTCTTCTCCCTCC
CCTTCTTATTTTTTATCACCCCTCCCCCCCCCTCCATCTCCTCTTTTTCT
CCCTCCTTATTCCGATTAATCGAACTCCACTTATTGGCG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGCTTGCTTTTGTTTCTTTGATAGC
ACAGAGTCTTGTGACTCTTTGTTCACTTGTGAGGAAACCTTCTCAGTTTT
AAGAAATGGTCCTATGATTTAAATAGCCTTAGTAAGAGCAGTAAGTGGAA
TTCACACTGCATGAAAGGCTCATGTAAAATAAGGTAGGATAAAGTCAGAA
CCAGGAGTCACTGTAAGTCCTAGACCTTTTAGTACACTGCTCATTCACTC
AGTGTTCTGTTTGGCTAGACTCTTTCTTTCAGTTTCACATCACTTCCAGC
AAGGTAAGTTAAATAAATTGTGATTGTACAGTTATAAGATTTTAATGGTA
GGATATGAAAAATCAACCGCCCATGAGAAAGGAGTTTTTAAGGGAAAGCA
ATCCATTCTGGAGCCCTCTGAAATGAAGTGGGTAATAGATGATCATTTAC
TCAACCTGAGAACAAGTTCTGATCTATATTTAATATATTCAATATACTTT
CAGAATAGCATTCTAAATCTTCTTCATCTTCATGTCACTAAGCCAAAGGC
AATGCCTGGGCTTTAAAGGAACTACACTATAGGATTATATGCTAACGAAT
TGTTGACTGTGGTCATCACACAAA

Query= MSMg01no143_i20.g1 MSMg01no143_i20.g1 CHROMAT_FILE:
MSMg01no143_i20.g1 PHD_FILE: MSMg01no143_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:08 2005
         (601 letters)



>mm_chr2_46398335_46399335
          Length = 1001

 Score = 1069 bits (553), Expect = 0.0
 Identities = 593/617 (96%), Gaps = 17/617 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgcttgcttttgtttctttgatagcacagagtcttgtgactctttgttcactt----- 55
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 872 tttgcttgcttttgtttctttgatagcacagagtcttgtgactctttgttcacttatctt 813

                                                                       
Query: 56  ------------gtgaggaaaccttctcagttttaagaaatggtcctatgatttaaatag 103
                       |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 812 caaagcctctcagtgaggaatccttctcagttttaagaaatagtcctatgatttaaatag 753

                                                                       
Query: 104 ccttagtaagagcagtaagtggaattcacactgcatgaaaggctcatgtaaaataaggta 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ccttagtaagagcagtaagtggaattcacactgcatgaaaggctcatgtaaaataaggta 693

                                                                       
Query: 164 ggataaagtcagaaccaggagtcactgtaagtcctagaccttttagtacactgctcattc 223
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 692 ggataaagtcagaaccaggagtcactgtaagtcctagacctttcagtacactgctcattc 633

                                                                       
Query: 224 actcagtgttctgtttggctagactctttctttcagtttcacatcacttccagcaaggta 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 actcagtgttctgtttggctagactctttctttcagtttcacatcacttccagcaaggta 573

                                                                       
Query: 284 agttaaataaattgtgattgtacagttataagattttaatggtaggatatgaaaaatcaa 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agttaaataaattgtgattgtacagttataagattttaatggtaggatatgaaaaatcaa 513

                                                                       
Query: 344 ccgcccatgagaaaggagtttttaagggaaagcaatccattctggagccctctgaaatga 403
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttggccatgagaaaggagtttttaagggaaagcaatccattctggagccctctgaaatga 453

                                                                       
Query: 404 agtgggtaatagatgatcatttactcaacctgagaacaagttctgatctatatttaatat 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agtgggtaatagatgatcatttactcaacctgagaacaagttctgatctatatttaatat 393

                                                                       
Query: 464 attcaatatactttcagaatagcattctaaatcttcttcatcttcatgtcactaagccaa 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attcaatatactttcagaatagcattctaaatcttcttcatcttcatgtcactaagccaa 333

                                                                       
Query: 524 aggcaatgcctgggctttaaaggaactacactataggattatatgctaacgaattgttga 583
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 332 aggcaatgcctgggctttaaaggaactacactataggattacatgctaacgaattgttga 273

                            
Query: 584 ctgtggtcatcacacaa 600
           |||||||||||||||||
Sbjct: 272 ctgtggtcatcacacaa 256


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)