Query= MSMg01no143_l05.b1 MSMg01no143_l05.b1 CHROMAT_FILE:
MSMg01no143_l05.b1 PHD_FILE: MSMg01no143_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:19 2005
(630 letters)
>mm_chr2_134799417_134800446
Length = 1030
Score = 1156 bits (598), Expect = 0.0
Identities = 622/630 (98%)
Strand = Plus / Plus
Query: 1 agaaaatacaaagatgttctctccagcactgtgcctgtgccaacttttttgggaacagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaatacaaagatgttctctccagcactgtgcctgtgccaacttttttgggaacagtt 260
Query: 61 ccatcatccaatgcttctcggtccatcacccagtttagaatttgagaaaagtcacccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatcatccaatgcttctcggtccatcacccagtttagaatttgagaaaagtcacccaag 320
Query: 121 gactctgtttatttgctacccttgactttgtggcaccattcagtgagttctctgttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactctgtttatttgctacccttgactttgtggcaccattcagtgagttctctgttctca 380
Query: 181 gaatgcttctctgcagggacaagggaaagttctggtctgagcatgcacagaaatcggatg 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 381 gaatgcttctctgcagggacaagggaaagttctggtctgagcatgcgcagaaatcagatg 440
Query: 241 taaagtgatctgatcttttctgtcagagcagattttcagggggccatgctgtaacaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagtgatctgatcttttctgtcagagcagattttcagggggccatgctgtaacaactg 500
Query: 301 ctgccaccattagtcaggttttgtgagcataggtgggcatgtagtcctgaaagctgactg 360
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 ctgccaccattagtcaggtttcgtgagcataggtgagcatgtagtcctgaaagctgactg 560
Query: 361 catctgctcctagcttacacctctcatgttttctatggtctctgcctccatgcgggagac 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 561 catctgctcctagcttacacctctcacgttttctatggtctctgcctccatgcaggagac 620
Query: 421 acaagcccatggctgacccaagcatgctgggcttgtgctaggaattttcagggttagcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaagcccatggctgacccaagcatgctgggcttgtgctaggaattttcagggttagcac 680
Query: 481 ctgtggaatgcttttcagtttctcctgcctcctctcactttttctatccagaaataccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtggaatgcttttcagtttctcctgcctcctctcactttttctatccagaaataccac 740
Query: 541 atatacaaaaagagcacagatagtaacaggaaacaaacccatcttacctcttaggttgga 600
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 atatacgaaaagagcacagatagtaacaggaaacaaacccatcttacctcttagtttgga 800
Query: 601 ttgttttaatgtgggtttgttttagcccag 630
||||||||||||||||||||||||||||||
Sbjct: 801 ttgttttaatgtgggtttgttttagcccag 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_l05.g1 MSMg01no143_l05.g1 CHROMAT_FILE:
MSMg01no143_l05.g1 PHD_FILE: MSMg01no143_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:19 2005
(625 letters)
>mm_chr2_134917506_134918532
Length = 1027
Score = 571 bits (295), Expect = e-167
Identities = 317/325 (97%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 2 agtacaagaactatg--aaaaaaaaaactaaactaagagataatactaacaaaccactct 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtacaagaactatgaaaaaaaaaaaactaaactaagagataatactaacaaaccactct 266
Query: 60 aaccatatgatagaaaactcacgagaatttgaaataggatgaacaaccaaaatatggaaa 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaccatatgatagaaaactcacaagaatttgaaataggatgaacaaccaaaatatggaaa 206
Query: 120 gactaatgaacaaatttctttaaagaacatgaactccctccccaaaacctacttaaggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gactaatgaacaaatttctttaaagaacatgaactccctccccaaaacctacttaaggag 146
Query: 180 aactgataaatctgaacagttctctctattaacgaatttatgttggtagatacaaaacaa 239
|||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 145 aactgataaacctaaacagttctctctattaacgaatttatgttggtacatacaaaacaa 86
Query: 240 aaacaaaatcaaaaagaaaaaaaccccaatgctctatctcagactgcctcatgatgaata 299
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 85 aaacaaaatcaaaaagaaaaaaaacccaatgctctatctcagactgcctcatgatgaatt 26
Query: 300 caacccaacactcaaagaagaaaca 324
|||||||||||||||||||||||||
Sbjct: 25 caacccaacactcaaagaagaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1027
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1017
Effective search space: 625455
Effective search space used: 625455
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
