CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATCCGCGG
AATTCTTTAAAGTTGTACTTCAAAGCAATAGTGATAAAAACTGCATGGTA
CTGGTATAGCGACAGACAAGTAGACTAATGGAATAGAATTGAAGACCCAG
AAATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGAAGCTAAA
ACCATTCAGTCGAAAAAAAAAAAAACAGTATTTTCAACAAATGGTGCTGT
CACACCTGGCGGTTATAATGTAGAAGAATGCAAATTGATCTATTCCTATC
TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTCCACATAAAAC
CAGAGACAGTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGAT
ATGGGCACAGGGGATCATAATTCAAATTCATTTATATAAATATCATGAAG
CAGAATTGCAGCAATGCACTGTAGTTCTATTTTTAACATTTTAAGGATTC
TCAATACCCTTTTTTATGATTGCTGCAGAATTTTGTATGCAGTGCCCAAG
ATTTCATTTATATTCATCCTAAACAATGCTTATTATTTTACTTTATTTTA
CTAGTGTCCATCATGAATGGATACATTGCTTTGAGTTAACTCTCCTTGAT
TATCTGTGTTCTTAAGCGACCTTTTACATATCTTTTGTCTTTCCTATATC
TCCTTTGGGAGTCATTATATTCAGATTTCTTGTTAATATGAAAT

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAAATGGTCTTTGAGAAGCAGCTGG
TTTCAGATGGATCTTTCACTCTCCTTCTCCTTGCCAAGTCTCCAGCATCA
TTGCCTCCGGTACTGCTGGCTTTATGCAGACAATTTGCTTAACACAGCCT
AAGAAGAGAGAATATATGAGGAAGAGCATCTGCCTGTCTGTTATGTTTAT
ACTTGGTTATGTGGCAGTGACATTAACCCCAATCATCTTCCTCTTACTGG
TACATGATGACTCAACACTGAGCAAGACATGTGCCACAGCTCCTGTAAGC
CACTATGAAGCTCTATAAATTTGTTCTGTCTTTTATCCAATCTTATGTCT
TTTTTTTATTAAGAGCCACTTAATAAATGTTAAAATAGATCACAGGAACT
AAATATATTATGTTTGTCTTAGTTAGTTTTGACTATGAATAATGCAATGC
AATCTTAGAGGGGAGTGTCAACTGAGGGATTTCACAGATCTGACTAGCCT
GTGAGCACATCTTCTGTGGATTATTTTAATTGTTAGTTGATAGAGTAGGT
CCTGATCCACTGTGGGCAGCTGCCACACACACCCCAGTGAAGTCTGCTTG
GCAGGCCGAGAGGCCTGAAAGTGCTCACGAGGCAAAGAGTTTCACAGAAA
CTCACCTCCTGGAGCTTTGGNGTTCTCATTAACCTGTATACTCATAC

Query= MSMg01no144_e21.g1 MSMg01no144_e21.g1 CHROMAT_FILE:
MSMg01no144_e21.g1 PHD_FILE: MSMg01no144_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:06 2005
         (672 letters)



>mm_chr2_81308839_81309907
          Length = 1069

 Score = 1208 bits (625), Expect = 0.0
 Identities = 659/672 (98%), Gaps = 3/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaatggtctttgagaagcagctggtttcagatggatctttcactctccttctccttgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatggtctttgagaagcagctggtttcagatggatctttcactctccttctccttgcc 260

                                                                       
Query: 61  aagtctccagcatcattgcctccggtactgctggctttatgcagacaatttgcttaacac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 aagtctccagcatcattgcctccggtactgctggctttatgcagacaatttgcttgacac 320

                                                                       
Query: 121 agcctaagaagagagaatatatgaggaagagcatctgcctgtctgttatgtttatacttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctaagaagagagaatatatgaggaagagcatctgcctgtctgttatgtttatacttg 380

                                                                       
Query: 181 gttatgtggcagtgacattaaccccaatcatcttcctcttactggtacatgatgactcaa 240
           |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttatgtggcagtgccattcaccccaatcatcttcctcttactggtacatgatgactcaa 440

                                                                       
Query: 241 cactgagcaagacatgtgccacagctcctgtaagccactatgaagctctataaatttgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgagcaagacatgtgccacagctcctgtaagccactatgaagctctataaatttgtt 500

                                                                       
Query: 301 ctgtcttttatccaatcttatgtcttttttttattaagagccacttaataaatgttaaaa 360
           || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ctttcttttatccaatcttatgtcttttttttattaagagtcacttaataaatgttaaaa 560

                                                                       
Query: 361 tagatcacaggaactaaatatattatgtttgtcttagttagttttgactatgaataatgc 420
           ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||   ||
Sbjct: 561 tagatcacaggtactaaatatattatgtttgtcttagttagttttaactatgaat---gc 617

                                                                       
Query: 421 aatgcaatcttagaggggagtgtcaactgagggatttcacagatctgactagcctgtgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aatgcaatcttagaggggagtgtcaactgagggatttcacagatctgactagcctgtgag 677

                                                                       
Query: 481 cacatcttctgtggattattttaattgttagttgatagagtaggtcctgatccactgtgg 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 678 cacatcttctgtggattattttaattgttagttgatatagtaggtcctgatccactgtgg 737

                                                                       
Query: 541 gcagctgccacacacaccccagtgaagtctgcttggcaggccgagaggcctgaaagtgct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gcagctgccacacacaccccagtgaagtctgcttggcaggccgagaggcctgaaagtgct 797

                                                                       
Query: 601 cacgaggcaaagagtttcacagaaactcacctcctggagctttggngttctcattaacct 660
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 798 cacgaggcaaagagtttcacagaaactcacctcctggagctttggtgttctcattaaccc 857

                       
Query: 661 gtatactcatac 672
           ||||||||||||
Sbjct: 858 gtatactcatac 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1069
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1059
Effective search space:   701058
Effective search space used:   701058
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)