Query= MSMg01no145_n09.b1 MSMg01no145_n09.b1 CHROMAT_FILE:
MSMg01no145_n09.b1 PHD_FILE: MSMg01no145_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:02 2005
(597 letters)
>mm_chr2_138651583_138652580
Length = 998
Score = 1094 bits (566), Expect = 0.0
Identities = 587/594 (98%), Gaps = 1/594 (0%)
Strand = Plus / Minus
Query: 5 gaattcagattgg-acatgctaaaaatacaatcacattttaaaaacctctacaaatgaat 63
||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 798 gaattcagattggaaaatgctaaaaatacaatcacactttaaaaacctctacaaatgaat 739
Query: 64 tgactgattctgtaaccctgcttgagaaacatcattcaaagtagggcatatgcctaatgt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cgactgattctgtaaccctgcttgagaaacatcattcaaagtagggcatatgcctaatgt 679
Query: 124 gcttgcctcagctttgcctacaaagaagcaaaagcaatgactttgcaatgattccactat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcttgcctcagctttgcctacaaagaagcaaaagcaatgactttgcaatgattccactat 619
Query: 184 atcaggagatggaaggctattgaaactagccctgtgtttctgatggaggggggaaagttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atcaggagatggaaggctattgaaactagccctgtgtttctgatggaggggggaaagttt 559
Query: 244 ctatattcaaagcctatactgaagatttgggtttagaggagaccaaagaaaatgcagttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctatattcaaagcctatactgaagatttgggtttagaggagaccaaagaaaatgcagttc 499
Query: 304 tttgtggaggctgacacagtgatcaggcctcagtctatacacacttttaaaacactaccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tttgtggaggctgacacagtgatcaggcctcagtctatacacacttttaaaacactaccc 439
Query: 364 taattctaaaatgtaataattcttcttcagagatgtgagtcatggctatgcaaacgcctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taattctaaaatgtaataattcttcttcagagatgtgagtcatggctatgcaaacgcctg 379
Query: 424 cctcatcatgattagctttctggatctcaagtattgtgggatacaaacagagataggtgc 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctcatcatgattagctttccggatctcaagtattgtgggatacaaacagagataggtgc 319
Query: 484 tgttaaaacagatgcctggaattcctagttgggtcctaattaggagaaaactctaaagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 318 tgttaaaacagatgcctggaattcctagttgggtcctaattaggagaaacctctaaagaa 259
Query: 544 tacttctgctaattcaactagatgaagagggggaagagagaaagaggaaggaga 597
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tacttgtgctaattcaactagatgaagagggggaagagagaaagaggaaggaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space: 579956
Effective search space used: 579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_n09.g1 MSMg01no145_n09.g1 CHROMAT_FILE:
MSMg01no145_n09.g1 PHD_FILE: MSMg01no145_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:02 2005
(590 letters)
>mm_chr2_138594817_138595806
Length = 990
Score = 1056 bits (546), Expect = 0.0
Identities = 579/590 (98%)
Strand = Plus / Plus
Query: 1 tctccacctgtaaagcagtggaatgcaaaattgaattctgacgaaagggcaatcaagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccacctgtaaagcagtggaatgcaaaattgaattctgacgaaagggcaatcaagggg 260
Query: 61 cactcctctttttaagaaaagcatagatttcaaggctttggtgctgatgcacagactcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactcctctttttaagaaaagcatagatttcaaggctttggtgctgatgcacagactcat 320
Query: 121 ttgaatacctctttgctttttgcaaatcacctgtttttacaagatgtctctactttttca 180
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 321 ttgaatacctctttgctttttgcaaatcacctgtctttataagatgtctctactttttca 380
Query: 181 agtaaggttatttctatataggaagtatgatttaacaatttttcaaagagcactttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtaaggttatttctatataggaagtatgatttaacaatttttcaaagagcactttcttt 440
Query: 241 atagcagtcttgatgactatccatttatccaagtttgattagaaagccttacagaggata 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 atagcagtcttgatgactatccatttatccaaggttgattagaaagccttacagaggata 500
Query: 301 ctttctatccacggggacaactatcataattctgtggcttctttgcaaaagagaccttga 360
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ctttctatccacggggacgactatcataattctgtggcttctcggcaaaagagaccttga 560
Query: 361 cagtgaacgctgacacatggaaagaccaattcatttgttcacagagaattcaattggctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgaacgctgacacatggaaagaccaattcatttgttcacagagaattcaattggctt 620
Query: 421 ggaagaaaatgtatttgtttagtggtcttatggcctgtttatcctatattcatcttgata 480
|||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||
Sbjct: 621 ggaagaaaatgtatttgtttagaggtcttgtggcctgtttatcctgtattcatcttgata 680
Query: 481 tgactggttaagagtctaaaaagcatcttagctttaattggggcaaaactcttccccaac 540
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 681 tgactggttaagagtctaaaaagcatcttagttttaattggggcaaaactcttcgccaac 740
Query: 541 tgaaaactgacttcagcaggtcagccattttccatagcatttgacagctt 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaaaactgacttcagcaggtcagccattttccatagcatttgacagctt 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
