Query= MSMg01no146_e24.b1 MSMg01no146_e24.b1 CHROMAT_FILE:
MSMg01no146_e24.b1 PHD_FILE: MSMg01no146_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:56 2005
(595 letters)
>mm_chr2_64881599_64882593
Length = 995
Score = 1073 bits (555), Expect = 0.0
Identities = 585/595 (98%)
Strand = Plus / Minus
Query: 1 tctcaatcttcctgcctcagtttttaaaacccttgacgagcttgggtcacaagaatggac 60
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 704 tctcaatcttcctgcctcagtttttaaaagtgttgacgagcttgggttacaagaatggac 645
Query: 61 aacagtttcttgttctctggcctctgaaggagagactttcgggtccctcccctggcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aacagtttcttgttctctggcctctgaaggagagactttcgggtccctcccctggcttat 585
Query: 121 aatggtgccaacagtccttagtattcaacatattgacttgctaattcatcatttaatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aatggtgccaacagtccttagtattcaacatattgacttgctaattcatcatttaatccc 525
Query: 181 ctcctcaggcttcccatggtattcttcctatgcaatcttctcttttattcttttaatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctcctcaggcttcccatggtattcttcctatgcaatcttctcttttattcttttaatagt 465
Query: 241 attacttcctaaacctttcaagtttatttgtagaaagcataggaggcatattgcattcat 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 464 attacttcctaaacctttcaagtttatttgtagaaagcatacgaggcatattgcattcat 405
Query: 301 gtcaggtaatagtgtatttcattagtgtctgcaggacctggctccactctactctgtatg 360
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtcaggtaatagtgtaactcaatagtgtctgcaggacctggctccactctactctgtatg 345
Query: 361 catggaaaactacttttcctagatcccacagctatgtggagttatgagaccagtctgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 catggaaaactacttttcctagatcccacagctatgtggagttatgagaccagtctgcca 285
Query: 421 ggtgtgtaaagcccacaatacctaagctacagttttcattctcccttccctaaccaagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggtgtgtaaagcccacaatacctaagctacagttttcattctcccttccctaaccaagac 225
Query: 481 caagtagatcatatgttctagaggtatgatggcttgaatggatgcttggtctgcagctgg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 224 caagtagatcatatgttctagaggtatgatggcttgaatggatgcttggtctgcagttgg 165
Query: 541 cagaactgtttgggaaggattaggaggtgtggcctctttggctgaggtgtgtcac 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tagaactgtttgggaaggattaggaggtgtggcctctttggctgaggtgtgtcac 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_e24.g1 MSMg01no146_e24.g1 CHROMAT_FILE:
MSMg01no146_e24.g1 PHD_FILE: MSMg01no146_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:56 2005
(651 letters)
>mm_chr2_64726008_64727058
Length = 1051
Score = 1137 bits (588), Expect = 0.0
Identities = 632/656 (96%), Gaps = 17/656 (2%)
Strand = Plus / Plus
Query: 1 acagattgcctcaaaaataatgttttatttcaagttagacctggttttaaaaataagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagattgcctcaaaaataatgttttatttcaagttagacctggttttaaaaataagcag 260
Query: 61 atccaataacaaaacagactggagaaaactctagaaatagatctgcccatgaatgagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccaataacaaaacagactggagaaaactctagaaatagatctgcccatgaatgagaag 320
Query: 121 tagaactagggggtcagatgcaaaggaaattcagaaaaagcaaacaaaataggatttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaactagggggtcagatgcaaaggaaattcagaaaaagcaaacaaaataggatttcat 380
Query: 181 aacatagcaattcatagtgcaattgaatatcgctaatcagaacagatcacaaatctatag 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 aacatagcaattcatagtgcaattgaatatccctaatcagaacagatcacaaatctatag 440
Query: 241 gtaaaatgaaaacctatcagacaccaccgcccccca--------tttttcaacaaaatgg 292
| |||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 441 gcaaaatgaaaacctatcagacaccacccccccccaaaaaaaac-----caacaaaatgg 495
Query: 293 aagatcatttgtaattgagttagggaaagatccatgaaagataaaattgaattgaaacct 352
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 496 aagatcatttgtaattgagttagg----gatccgtgaaagataaaattgaattgaaacct 551
Query: 353 ctcctagctaagaatttctgctcaaaagatacctaccatagaaagaatgaaaatacacag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctcctagctaagaatttctgctcaaaagatacctaccatagaaagaatgaaaatacacag 611
Query: 413 atggggtgaaaatatttacaaatcacctttccgataaaagattttttttaagcccaaaca 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atggggtgaaaatatttacaaatcacctttccgataaaagattttttttaagcccaaaca 671
Query: 473 tgagtaaatcttatatactctcttgtggtaatacaaacaatttcagcaatactagcaaag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgagtaaatcttatatactctcttgtggtaatacaaacaatttcagcaatactagcaaag 731
Query: 533 caaattcagtaatagtaagacacaagtttcaaattaaaaggaaggagctaaatatttgca 592
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 732 caaattcagtaatagtaagacacaaatttaaaattaaaaggaaggagctaaatatttgca 791
Query: 593 taggcagaccatcagacaggatgtgacaatagggaagaggggtgtggtcagattta 648
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 792 taggcagaccatcagacaggatgtgacaacagggaagaggggtgtggtcagattta 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
