Query= MSMg01no146_h06.b1 MSMg01no146_h06.b1 CHROMAT_FILE:
MSMg01no146_h06.b1 PHD_FILE: MSMg01no146_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:14 2005
(538 letters)
>mm_chr2_92862477_92863414
Length = 938
Score = 932 bits (482), Expect = 0.0
Identities = 524/538 (97%)
Strand = Plus / Plus
Query: 1 aaccccgggggggcaaagggagggatcccctttagaaactgagcaccaagggggcactgg 60
|||||||||| ||||||||||||||||| |||||||||||| || |||||||||||||
Sbjct: 201 aaccccggggtggcaaagggagggatccaggttagaaactgagtacaaagggggcactgg 260
Query: 61 gcacatacgtgatgggtgaggggcccaccaatggagcaaggcagcctggtatattcacca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gcacatacgtgatgggtgaggggcccaccaatggagcaaggcagcctggtatgttcacca 320
Query: 121 tgaagcatccctgggcttgtcttatagtcctgctctgaaagatttgcctgcccgctgcat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagcatccctgggcttgtcttatggtcctgctctgaaagatttgcctgcccgctgcat 380
Query: 181 gcattccctcccttcacaccacactcaggctatgtgccaatcagatcaacaggctggcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcattccctcccttcacaccacactcaggctatgtgccaatcagatcaacaggctggcga 440
Query: 241 gcggtcagcatcctaagcaaaggccctaaaggaccatgcacactcactctgccctgcctc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcggtcagcatcctaagcaaaggccctaaaggaccatgcacactcactctgccctgcctt 500
Query: 301 ctcctgaagcatgcgtgtttcagcaaacttcctggttttgattgttttgttgttttggag 360
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcctgaagcatgtgtggctcagcaaacttcctggttttgattgttttgttgttttggag 560
Query: 361 acagtctgctaaagccgagtctagctttgaattcttgatcctcctgcctcagcctcctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagtctgctaaagccgagtctagctttgaattcttgatcctcctgcctcagcctcctga 620
Query: 421 gctgagatgacaagcatataccaatgtatccagcttcatgttttaaaataaaaccaatca 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 gctgagatgacaagcatataccaatgtattcagcttcatgttttaaaataaaaccaatca 680
Query: 481 atggatagaatgcaatgcgggaaggggagtattctaaccacaactatatgaacactat 538
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 atggatagaatgcaatgcgggaaggggagtattctaatcacaactatatgaacactat 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_h06.g1 MSMg01no146_h06.g1 CHROMAT_FILE:
MSMg01no146_h06.g1 PHD_FILE: MSMg01no146_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:15 2005
(189 letters)
>mm_chr2_93022922_93023509
Length = 588
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 1 tccttctcccccagtctgtaaactagccgtccctaacacacgcccccatggctgccctcc 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 358 tccttctcctccagtctgtaaactagccgtccctaacacacgcccccatggctgccct-c 300
Query: 61 cccagctgactcatctccactgcaacacttggccatggatgctgggggaacaagaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cccagctgactcatctccactgcaacacttggccatggatgctgggggaacaagaaatgt 240
Query: 121 cacacagctccttacctggagaaagaagccttgggggcggtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cacacagctccttacctggagaaagaagccttgggggcggtgtgtgtgtgtgtgtgtgtg 180
Query: 181 tgtgtgt 187
|||||||
Sbjct: 179 tgtgtgt 173
Score = 54.9 bits (28), Expect = 3e-12
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 160 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 187
||||||||||||||||||||||||||||
Sbjct: 115 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 142
Score = 54.9 bits (28), Expect = 3e-12
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 160 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 187
||||||||||||||||||||||||||||
Sbjct: 117 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 144
Score = 54.9 bits (28), Expect = 3e-12
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 160 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 187
||||||||||||||||||||||||||||
Sbjct: 119 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 4
Length of query: 189
Length of database: 588
Length adjustment: 8
Effective length of query: 181
Effective length of database: 580
Effective search space: 104980
Effective search space used: 104980
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
