Query= MSMg01no148_o08.b1 MSMg01no148_o08.b1 CHROMAT_FILE:
MSMg01no148_o08.b1 PHD_FILE: MSMg01no148_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:57 2005
(675 letters)
>mm_chr2_172462136_172463211
Length = 1076
Score = 1243 bits (643), Expect = 0.0
Identities = 664/671 (98%), Gaps = 3/671 (0%)
Strand = Plus / Plus
Query: 7 gaattcaaa-gcatttcaaatttttcttattttacatttgttttcttatcatctgtcagt 65
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaaagcatttcaaatttttcttattttacatttgttttcttatcatctgtcagt 266
Query: 66 gggtgacatgcacacgtgcatgtgaacacactcgtccaatagtgtgtgtggaagtctggg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gggtgacatgcacacgtgcatgtgaacacactcgtccaatagtgtgtgtggaagtctggg 326
Query: 126 tcctggggactaagctcaggtcatcagggttggcagcaatcgttttttgtgtgccgagcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcctggggactaagctcaggtcatcagggttggcagcaatcgttttttgtgtgccgagcc 386
Query: 186 agctcgccagcctcacgaatgcacatgctggatgcagaggccaaggcagcgttgacatga 245
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 387 agctcgccagcctcacgaatgcacatgctggatgcagaggccaaggcagcattgacatga 446
Query: 246 gttcgaagctaacctggg-tgacatagtaagtttggggtcagtctgaggtacagtgggag 304
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttcgaagctaacctgggct-acatagtaagtttggggtcagtctgaggtacagtgggag 505
Query: 305 acgcctcctccaccaagcaaattataacaaaagcttgtgatacacacacagggctcagtc 364
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgcctcctccaccaagcaaattataacaaaagcttgtgatacacacacagggctcagtc 565
Query: 365 agtcttttaatctctgaattgtattttatttactttaacttttttgtgatgttaagaatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agtcttttaatctctgaattgtattttatttactttaacttttttgtgatgttaagaatt 625
Query: 425 gaacctgggccttgcatgagctagacaagtcttgtattccaaatttactccttgtccttg 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 626 gaacctgggccttgcatgagctagacaagtcttatattccaaatttactccttgtccttg 685
Query: 485 tgcagccctggctgccccgctctctgtagttgaagaaggacctcctgaccctcctgtctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgcagccctggctgccccgctctctgtagttgaagaaggacctcctgaccctcctgtctc 745
Query: 545 tatgtttgagatgactggtgtgcaccatcttgcttggtttacccagggctaaggatggta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tatgtttgagatgactggtgtgcaccatcttgcttggtttacccagggctaaggatggta 805
Query: 605 cctgggctttgtgcatgctgggcaggaaccaactgagtgagccccacagtggggtctgtg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 cctgggctttgtgcatgctgggcaggaaccaactgagtgagccccacagtggggtctgtg 865
Query: 665 tgattctgtga 675
|| ||||||||
Sbjct: 866 tggttctgtga 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_o08.g1 MSMg01no148_o08.g1 CHROMAT_FILE:
MSMg01no148_o08.g1 PHD_FILE: MSMg01no148_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:57 2005
(644 letters)
>mm_chr2_172613972_172615016
Length = 1045
Score = 700 bits (362), Expect = 0.0
Identities = 427/456 (93%), Gaps = 17/456 (3%)
Strand = Plus / Minus
Query: 2 tgttagactgtgaggatgctggaaatgcagcctcgggtggagctggaagggaatcatatc 61
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 530 tgttagactgtgaggatgctggaaatgcagcctcgggtggagctggaagggactcatatc 471
Query: 62 cataatcccgacatagatctgggcttacagggagctccaggaacagcggccgctaagcct 121
|||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 470 aataatcccaacatagatctgggcttacagggatctccaggaacagcagccgctaagcct 411
Query: 122 gatgagcttccagatttaaactaagccctgactgggggtgggctgccatagttttgttcc 181
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gatgagcttccagatctaaactaagccctgactgggggtgggctgccatagttttgttcc 351
Query: 182 caggcgagcacagcatctagctcactccacagaggtgcttgctgaaagcgctgggctt-t 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caggcgagcacagcatctagctcactccacagaggtgcttgctgaaagcgctgggcttca 291
Query: 241 cagacccttccagggaaggagagaagctgagttctctccaatgtcggctctgtggccctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagacccttccagggaaggagagaagctgagttctctccaatgtcggctctgtggccctt 231
Query: 301 tcctaggttagaactgcattccagtaaaatctctctctctctgtctctctctctctctgt 360
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 230 tcctaggttagaactgcattccagtaaaatctctctc------tctctctctctctctgt 177
Query: 361 ctctctctctgtgtctctctctctttctctatctctgtctctctctctctgtgtctctct 420
|||||||||| ||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 176 ctctctctctctgtctctctctctgtc----tctctgtctctctctc----tgtctctct 125
Query: 421 ctgtgtctctctctctgtctctttctctttctctct 456
| | ||||||||||| ||||| |||||||||||||
Sbjct: 124 -t-tctctctctctctttctctctctctttctctct 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space: 656190
Effective search space used: 656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
