Query= MSMg01no149_j03.b1 MSMg01no149_j03.b1 CHROMAT_FILE:
MSMg01no149_j03.b1 PHD_FILE: MSMg01no149_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:53 2005
(345 letters)
>mm_chr2_160272862_160273606
Length = 745
Score = 613 bits (317), Expect = e-180
Identities = 335/341 (98%)
Strand = Plus / Plus
Query: 5 gaattccacatcatcccaggggaaggagagtctggagaagctcctggagagacatggcct 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacatcagcccaggggaaggagagtctggagaagctcctggagagacatggcct 264
Query: 65 tgtctatccccctctgatctgatggcatctccctatactctaaaggctaagacctggcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtctatccccctctgatctgatggcatctccctatactctaaaggctaagacctggcaa 324
Query: 125 ctacttaacagtgatctacctgcttcttacagtcacatgaagcacaaaacccctaattag 184
||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 325 ctatttaacagtgatctacctgcttcttatagtcacgtgaagcacaaaacccctaattag 384
Query: 185 atttagaatggcctaatgcccttctccacgagcaaagatgggtgtctcttcctctcctcg 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttagaatggcttaatgcccttctccacgagcaaagatgggtgtctcttcctctcctcg 444
Query: 245 tctcctcattggcctcaccaccacctccatcaattccattgcttatgatgagttaagtcc 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 tctcctcattggcctcaccaccacctccgtcaattccattgcttatgatgagttaagtcc 504
Query: 305 tttgcatggattaatcctagtctgctcatccccacaactac 345
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttgcatggattaatcctagtctgctcatccccacaactac 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_j03.g1 MSMg01no149_j03.g1 CHROMAT_FILE:
MSMg01no149_j03.g1 PHD_FILE: MSMg01no149_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:53 2005
(370 letters)
>mm_chr2_160442879_160443648
Length = 770
Score = 642 bits (332), Expect = 0.0
Identities = 358/370 (96%), Gaps = 6/370 (1%)
Strand = Plus / Minus
Query: 1 caggacagccaggaatgctacacagagaaaccctgtctcaaaacaacaaagaaaagtggg 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 caggacagccaggaaagctacacagagaaaccctgtctcaaaacaacaaagaaaggtggg 682
Query: 61 cgtggtggcgcacgcctttaattccagcactcggaggatggatctctgagtttgaggcca 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cgtggtg------gcctttaattccagcactcggaggatggatctctgagtttgaggcca 628
Query: 121 gcctggtctacagagtgagttctaggatagtcagggctacacagaaaaaccctgtcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gcctggtctacagagtgagttctaggatagtcagggctacacagaaaaaccctgtcttta 568
Query: 181 tcccctttcattgggtagagcatcaaaaattgtaaccgatccagaatctgtaattggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcccctttcattgggtagagcatcaaaaattgtaaccgatccagaatctgtaattggtat 508
Query: 241 tttaactttctatttaacatttgttcattcgtttctttctttatttttgcagtgctgaga 300
|||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 507 tttaactttcaatttaacattttttcattagtttctttctttatttttgcagtgctgaga 448
Query: 301 ttgaatttaggggcactccagcactgatctccacccctgtcactggttcttgtagttttt 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttgaatttaggggtactccagcactgatctccacccctgtcactggttcttgtagttttt 388
Query: 361 gacttggtct 370
||||||||||
Sbjct: 387 gacttggtct 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
